RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NR6A1Q15406 480 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 TBC1D25Q3MII6 688 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 NKAIN1Q4KMZ8 207 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 ATP6AP1LQ52LC2 224 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 C1orf189Q5VU69 101 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 MRM1Q6IN84 353 aaKnown RBP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 EPGNQ6UW88 154 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 LARP4Q71RC2 724 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 MED25Q71SY5 747 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 TIPARPQ7Z3E1 657 aaKnown RBP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 MAVSQ7Z434 540 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 MTERF4Q7Z6M4 381 aaKnown RBP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 ZFAND4Q86XD8 727 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 NLGN4XQ8N0W4 816 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 DTWD1Q8N5C7 304 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 C1orf52Q8N6N3 182 aaKnown RBP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 GALNT6Q8NCL4 622 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 NLGN4YQ8NFZ3 816 aaPredicted RBP10.96□□□□□ -0.65
SCN9A-204ENST00000452182 FKBP10Q96AY3 582 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 CHMP6Q96FZ7 201 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 FCRL1Q96LA6 429 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 SLC26A1Q9H2B4 701 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 LYRM4Q9HD34 91 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 FGFR1OP2Q9NVK5 253 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 MCM8Q9UJA3 840 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 ANGPTL2Q9UKU9 493 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 PADI1Q9ULC6 663 aa10.96□□□□□ -0.65
SCN9A-204ENST00000452182 A0A0G2JN53 185 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ATP6AP2A0A1C7CYW4 349 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SRRM3A6NNA2 597 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SGK494L7N484 410 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SDHDO14521 159 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SEC22BO75396 215 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RDH16O75452 317 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 EEDO75530 441 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ATP6AP2O75787 350 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 B3GALT4O96024 378 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CD63P08962 238 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 FBLP22087 321 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 IL10P22301 178 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CERS1P27544 350 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TPP2P29144 1249 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TIA1P31483 386 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 GSTM5P46439 218 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 OR1D4P47884 311 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TRA2BP62995 288 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MAD2L1Q13257 205 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SLC9A5Q14940 896 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RFTN2Q52LD8 501 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 C6orf136Q5SQH8 315 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 OGFOD2Q6N063 350 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ACTRT2Q8TDY3 377 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ADAMTS18Q8TE60 1221 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 COL26A1Q96A83 441 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TUBGCP3Q96CW5 907 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SORBS1Q9BX66 1292 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TRIM55Q9BYV6 548 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TGIF2Q9GZN2 237 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 AKTIPQ9H8T0 292 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SLC22A11Q9NSA0 550 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 LYARQ9NX58 379 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MS4A12Q9NXJ0 267 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 DAPP1Q9UN19 280 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 WBP11Q9Y2W2 641 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SEC16AO15027 2179 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 SPTBN2O15020 2390 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 AKAP13Q12802 2813 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TEX51A0A1B0GUA7 166 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ARHGAP10A1A4S6 786 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RAD1O60671 282 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 PEX11AO75192 247 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MYO1DO94832 1006 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 KLK1P06870 262 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 TROVE2P10155 538 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 LIPCP11150 499 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 PCSK2P16519 638 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 STAT5AP42229 794 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RPL38P63173 70 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 GNGT1P63211 74 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RAE1P78406 368 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 EMX2Q04743 252 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 RUNX2Q13950 521 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CCNYL2Q5T2Q4 361 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ARHGAP40Q5TG30 622 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 VWA5B1Q5TIE3 1220 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 NOXRED1Q6NXP6 359 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MRPL14Q6P1L8 145 aaKnown RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CYP20A1Q6UW02 462 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 COX15Q7KZN9 410 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 OVCH1Q7RTY7 1134 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CA13Q8N1Q1 262 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 METTL27Q8N6F8 245 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CEP70Q8NHQ1 597 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MR1Q95460 341 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 OR1F2PQ96R84 312 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 CHST8Q9H2A9 424 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 WDR54Q9H977 334 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 AKIRIN1Q9H9L7 192 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MKKSQ9NPJ1 570 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms