RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 HNF4AP41235 474 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 TNFSF10P50591 281 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 TAS2R50P59544 299 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 PWP1Q13610 501 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF460Q14592 562 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ABRAXAS2Q15018 415 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ACAP2Q15057 778 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 INAQ16352 499 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 EXT1Q16394 746 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 DEFB134Q4QY38 66 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ATG16L1Q676U5 607 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 RPUSD3Q6P087 351 aaKnown RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 THOC6Q86W42 341 aaKnown RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 NUDCD3Q8IVD9 361 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 CCDC63Q8NA47 563 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF75CPQ92670 426 aaPredicted RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 NEIL2Q969S2 332 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 PDLIM5Q96HC4 596 aaKnown RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF354BQ96LW1 612 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 OR1F2PQ96R84 312 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 LPAR4Q99677 370 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 MRPL57Q9BQC6 102 aaKnown RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 MANSC1Q9H8J5 431 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ZFP69BQ9UJL9 534 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 EMCNQ9ULC0 261 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 SPTAN1Q13813 2472 aaKnown RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 NAV2Q8IVL1 2488 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 USP9XQ93008 2570 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 OR5H15A6NDH6 313 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 H2AFYO75367 372 aaKnown RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 VIMP08670 466 aaKnown RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF888P0CJ79 500 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 NEFHP12036 1026 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 ASPHQ12797 758 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 HIST2H2BCQ6DN03 193 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 ANKRD37Q7Z713 158 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 CPLX4Q7Z7G2 160 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 ADAMTSL2Q86TH1 951 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 CENPLQ8N0S6 344 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF740Q8NDX6 193 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 TRPV3Q8NET8 790 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 CCT6BQ92526 530 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 PSMF1Q92530 271 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 CCT8L2Q96SF2 557 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 PELI2Q9HAT8 420 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 SLC22A14Q9Y267 594 aa20.38■□□□□ 0.85
C9orf3-208ENST00000451893 CDC7O00311 574 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 WDR47O94967 919 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 RASAL1O95294 804 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 CRYABP02511 175 aaKnown RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 CPA3P15088 417 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 HNMTP50135 292 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OR4D2P58180 307 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 ATP6V0D1P61421 351 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OLR1P78380 273 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 SFT2D3Q587I9 215 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 PLAG1Q6DJT9 500 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 PAPD4Q6PIY7 484 aaKnown RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 SBSNQ6UWP8 590 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 MAMDC2Q7Z304 686 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 PDSS2Q86YH6 399 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 PLD6Q8N2A8 252 aaKnown RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OR5T3Q8NGG3 340 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 BCAS4Q8TDM0 211 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 TBC1D20Q96BZ9 403 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 IMMP1LQ96LU5 166 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 GPR78Q96P69 363 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OR4K3Q96R72 315 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 MRPL46Q9H2W6 279 aaKnown RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 COPG2Q9UBF2 871 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OARD1Q9Y530 152 aa20.37■□□□□ 0.85
C9orf3-208ENST00000451893 USP9YO00507 2555 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-208ENST00000451893 OR2W5A6NFC9 320 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 NCF1BA6NI72 391 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-208ENST00000451893 NCF1CA8MVU1 366 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-208ENST00000451893 LDLRP01130 860 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 FHP07954 510 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 CCDC166P0CW27 439 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 RNF224P0DH78 156 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 NCF1P14598 390 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-208ENST00000451893 GRK2P25098 689 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 AHRP35869 848 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 SEC24CP53992 1094 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 SNRPNP63162 240 aaKnown RBP20.36■□□□□ 0.85
C9orf3-208ENST00000451893 IRF9Q00978 393 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 MEP1AQ16819 746 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 FCRLBQ6BAA4 426 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 OR4K1Q8NGD4 311 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 KCTD4Q8WVF5 259 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 NXNL1Q96CM4 212 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 CCDC126Q96EE4 140 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 MOCOSQ96EN8 888 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 FAR2Q96K12 515 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 BARD1Q99728 777 aaKnown RBP20.36■□□□□ 0.85
C9orf3-208ENST00000451893 RNF32Q9H0A6 362 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 RHBGQ9H310 441 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 IGSF5Q9NSI5 407 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 WWOXQ9NZC7 414 aa20.36■□□□□ 0.85
C9orf3-208ENST00000451893 LRRTM2O43300 516 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 GALR3O60755 368 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms