RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 A0A0G2JMZ2 1700 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 LRRC37A2A6NM11 1700 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 COL4A5P29400 1685 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 MICAL3Q7RTP6 2002 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 TRAV6A0A075B6T7 132 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 C7orf66A4D0T2 115 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 HAS3O00219 553 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 OR1I1O60431 355 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ECI2O75521 394 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SNAPINO95295 136 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CBX7O95931 251 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 DHFRP00374 187 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 IL6P05231 212 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GLAP06280 429 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CXCL3P19876 107 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 DNASE1P24855 282 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ADORA2BP29275 332 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ICAM3P32942 547 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ADRA1BP35368 520 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 HNF1BP35680 557 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 HTR6P50406 440 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CRYZQ08257 329 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 KCTD2Q14681 263 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SPHARQ15513 63 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 TSNQ15631 228 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 SPDYE7PQ495Y7 208 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NOMO2Q5JPE7 1267 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PDSS1Q5T2R2 415 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CD276Q5ZPR3 534 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ATRAIDQ6UW56 229 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GPR155Q7Z3F1 870 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 OR9Q1Q8NGQ5 310 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NT5C3BQ969T7 300 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 HSH2DQ96JZ2 352 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 TSGA13Q96PP4 275 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 OR52E6Q96RD3 313 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 NPY6RQ99463 290 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 FEVQ99581 238 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 SOSTQ9BQB4 213 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 C1QTNF3Q9BXJ4 246 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 RNF146Q9NTX7 359 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 DCAF16Q9NXF7 216 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 ERAP1Q9NZ08 941 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 GPRC5BQ9NZH0 403 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 MARCH4Q9P2E8 410 aaPredicted RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 RPS6KA6Q9UK32 745 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 MAFFQ9ULX9 164 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PPIEQ9UNP9 301 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 GINS2Q9Y248 185 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 LSM2Q9Y333 95 aaKnown RBP8.28□□□□□ -1.08
LSM5-208ENST00000450169 SSC5DA1L4H1 1573 aa8.28□□□□□ -1.08
LSM5-208ENST00000450169 PQLC2LA1A4F0 135 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SMIM30A4D0T7 59 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 H7C2Y5 167 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CCL22O00626 93 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 WNT9AO14904 365 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TPST2O60704 377 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 HPGDSO60760 199 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 IL2RAP01589 272 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SLC6A1P30531 599 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 BAG6P46379 1132 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 GDI2P50395 445 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 STAT5BP51692 787 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 SMSP52788 366 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 RPL38P63173 70 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 TIAL1Q01085 375 aaKnown RBP eCLIP8.27□□□□□ -1.09
LSM5-208ENST00000450169 ABHD18Q0P651 414 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 LAMTOR4Q0VGL1 99 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ABRQ12979 859 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 GPR17Q13304 367 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ADAM15Q13444 863 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 CAMK2DQ13557 499 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 LRRC32Q14392 662 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 PTPRCAPQ14761 206 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TSC22D1Q15714 1073 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 PABPC1L2AQ5JQF8 200 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 RGS7BPQ6MZT1 257 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 MSANTD2Q6P1R3 559 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 METAP1DQ6UB28 335 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 RANBP10Q6VN20 620 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 KANSL1Q7Z3B3 1105 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ATAD1Q8NBU5 361 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 TEX47Q8TBZ9 253 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 POF1BQ8WVV4 589 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 WNT8BQ93098 351 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 OTUB1Q96FW1 271 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 SCMH1Q96GD3 660 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 ERMAPQ96PL5 475 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 DPH7Q9BTV6 452 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 KATNAL1Q9BW62 490 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.09
LSM5-208ENST00000450169 DPY30Q9C005 99 aa8.27□□□□□ -1.09
LSM5-208ENST00000450169 POPDC3Q9HBV1 291 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms