RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 LYSMD1Q96S90 227 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 MED4Q9NPJ6 270 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 NUP205Q92621 2012 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 H0Y3Z8 333 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 RFXANKO14593 260 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 GNB5O14775 395 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 SIX3O95343 332 aaPredicted RBP8.06□□□□□ -1.12
HCG18-238ENST00000449544 ZNF682O95780 498 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 EFNA1P20827 205 aaPredicted RBP8.06□□□□□ -1.12
HCG18-238ENST00000449544 SERPINB4P48594 390 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 DOC2AQ14183 400 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 LRRC23Q53EV4 343 aaPredicted RBP8.06□□□□□ -1.12
HCG18-238ENST00000449544 NUP54Q7Z3B4 507 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 ZC3HC1Q86WB0 502 aaKnown RBP8.06□□□□□ -1.12
HCG18-238ENST00000449544 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 CT55Q8WUE5 264 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 ZNF480Q8WV37 535 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 SLC12A9Q9BXP2 914 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 DERL2Q9GZP9 239 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 HSD3B7Q9H2F3 369 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 TMEM27Q9HBJ8 222 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 SLC17A6Q9P2U8 582 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 PDE10AQ9Y233 779 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 DLGAP4Q9Y2H0 992 aa8.06□□□□□ -1.12
HCG18-238ENST00000449544 MYOFQ9NZM1 2061 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 IGHV5-10-1A0A0J9YXX1 117 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 A1L4Q6 167 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 AIM2O14862 343 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SPINT1O43278 529 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 HLA-DQA2P01906 255 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 ALDOAP04075 364 aaKnown RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 HOXC4P09017 264 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 PORP16435 677 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 CR2P20023 1033 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 IL10P22301 178 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 TEAD1P28347 426 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CD1CP29017 333 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 HSD17B3P37058 310 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 FASLGP48023 281 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 RALGDSQ12967 914 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CUL3Q13618 768 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CYLC2Q14093 348 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 TEDDM1Q5T9Z0 273 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 LIPMQ5VYY2 423 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 LARP4Q71RC2 724 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■■■■□ 25.9
HCG18-238ENST00000449544 SYVN1Q86TM6 617 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SPACA3Q8IXA5 215 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 GLIS1Q8NBF1 620 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 HIPK4Q8NE63 616 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SARAFQ96BY9 339 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 EHD3Q9NZN3 535 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 TRAF6Q9Y4K3 522 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 DOCK6Q96HP0 2047 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 IGHV3-20A0A0C4DH32 117 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 PRR19A6NJB7 356 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 FAM166BA8MTA8 275 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 B4E171 279 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 E9PBE3 544 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 IL2RAP01589 272 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 HOXB3P14651 431 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 CXCR1P25024 350 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 AOAHP28039 575 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 PTPN4P29074 926 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 RPL4P36578 427 aaKnown RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 TSPAN7P41732 249 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 DIO3P55073 304 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 PWP1Q13610 501 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 ENPP2Q13822 863 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 FASTKD3Q14CZ7 662 aaKnown RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 SPIN4Q56A73 249 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 C10orf62Q5T681 223 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 NEK10Q6ZWH5 1172 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 TNIP2Q8NFZ5 429 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 LPGAT1Q92604 370 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 GAL3ST3Q96A11 431 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SERINC2Q96SA4 455 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CD244Q9BZW8 370 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 PIF1Q9H611 641 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 C1orf109Q9NX04 203 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 NDE1Q9NXR1 346 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 ANGPT4Q9Y264 503 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 RPH3AQ9Y2J0 694 aaPredicted RBP8.05□□□□□ -1.12
HCG18-238ENST00000449544 A0A0G2JMZ2 1700 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SPG11Q96JI7 2443 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CCDC154A6NI56 674 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 TM9SF1O15321 606 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 BGNP21810 368 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 CPOXP36551 454 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 SLC1A6P48664 564 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 LIMK1P53667 647 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 GPR85P60893 370 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 HMGCS1Q01581 520 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 NCF4Q15080 339 aa8.05□□□□□ -1.12
HCG18-238ENST00000449544 GPR68Q15743 365 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms