RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TTC39CQ8N584 583 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ZFP62Q8NB50 900 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 AKAP1Q92667 903 aaKnown RBP eCLIP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 TFAP2CQ92754 450 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 HOXB13Q92826 284 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ITFG2Q969R8 447 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 EPSTI1Q96J88 318 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 C1orf74Q96LT6 269 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 TRIM62Q9BVG3 475 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 PITPNM3Q9BZ71 974 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 MAGEH1Q9H213 219 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 DEPPQ9NTK1 212 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF226Q9NYT6 803 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 IKZF3Q9UKT9 509 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 NEU3Q9UQ49 428 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ALPK2Q86TB3 2170 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 RAI1Q7Z5J4 1906 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ATP6AP2A0A1C7CYW4 349 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ZAR1LA6NP61 321 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 E5RJQ4 531 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 G3V3Y1 287 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 J3KR12 359 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 BTN3A1O00481 513 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 DSCR3O14972 297 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 KMOO15229 486 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ATP6AP2O75787 350 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 PDE5AO76074 875 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 HEXBP07686 556 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CYP2A6P11509 494 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 NUDT6P53370 316 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 SEC24CP53992 1094 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 FOXF2Q12947 444 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 KLF1Q13351 362 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 MAMLD1Q13495 774 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 GGTLC2Q14390 218 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CNGA2Q16280 664 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 LRRC66Q68CR7 880 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 DENND1BQ6P3S1 775 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CLEC2AQ6UVW9 174 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 SH2D5Q6ZV89 423 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 NLRP14Q86W24 1093 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ADGRG3Q86Y34 549 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 THNSL2Q86YJ6 484 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CCDC65Q8IXS2 484 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 DNAJC22Q8N4W6 341 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF525Q8N782 197 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ZDHHC22Q8N966 263 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM174Q8WUU8 243 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CASKIN2Q8WXE0 1202 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 SPATA13Q96N96 652 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 TBX15Q96SF7 602 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 RBM4BQ9BQ04 359 aaKnown RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 MED18Q9BUE0 208 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 TUBB6Q9BUF5 446 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 GATA5Q9BWX5 397 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 THAP9Q9H5L6 903 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 XKR8Q9H6D3 395 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 UPF2Q9HAU5 1272 aaKnown RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 CUTCQ9NTM9 273 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 SPRR3Q9UBC9 169 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 FEZ2Q9UHY8 353 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 SCOCQ9UIL1 159 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 KLHL20Q9Y2M5 609 aa4.51□□□□□ -1.69
SDCBP-205ENST00000447267 KLF13Q9Y2Y9 288 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-205ENST00000447267 LOC102723996A0A087X1L8 192 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 A0A1B0GVC2 190 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 A0A1W2PQ72 361 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 FAM72CH0Y354 149 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 PSMD11O00231 422 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 CHUKO15111 745 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 PRSS23O95084 383 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 EPPINO95925 133 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 DANCRP0C864 163 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 EGR2P11161 476 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 APEHP13798 732 aaKnown RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 GABRA1P14867 456 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ALOX15P16050 662 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 SLC25A16P16260 332 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 GCH1P30793 250 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 CPOXP36551 454 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 GPD2P43304 727 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 MAGEA5P43359 124 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 CYB561P49447 251 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 KIF5AQ12840 1032 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 XRCC4Q13426 336 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 TAZQ16635 292 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 KHDC1Q4VXA5 237 aaKnown RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 RILPL1Q5EBL4 403 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 KPRPQ5T749 579 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-205ENST00000447267 ARMC12Q5T9G4 340 aa4.5□□□□□ -1.69
SDCBP-205ENST00000447267 FAM72AQ5TYM5 149 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms