RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PDZK1P1A8MUH7 402 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 FOXE1O00358 373 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 CTDSP2O14595 271 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 PRAMEF10O60809 474 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 ARAFP10398 606 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 POU2F1P14859 743 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 RCVRNP35243 200 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 NR4A2P43354 598 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 NKX2-5P52952 324 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SLC7A9P82251 487 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 RHAGQ02094 409 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF770Q6IQ21 691 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 PTCHD4Q6ZW05 846 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 RNF130Q86XS8 419 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 AQP11Q8NBQ7 271 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 ST13P5Q8NFI4 369 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 TMEM159Q96B96 161 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 PKP4Q99569 1192 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 FZD3Q9NPG1 666 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 DSPPQ9NZW4 1301 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 GPX5O75715 221 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 CCNKO75909 580 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SCG5P05408 212 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 ENDOUP21128 410 aaKnown RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 HLA-FP30511 346 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SYTL3Q4VX76 610 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 GDPGP1Q6ZNW5 385 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 HSD11B1LQ7Z5J1 315 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SLC30A8Q8IWU4 369 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 CLIP4Q8N3C7 705 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 FAM46DQ8NEK8 389 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 NEIL2Q969S2 332 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 TMCO6Q96DC7 493 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 CEP19Q96LK0 163 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 OPALINQ96PE5 141 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SLC25A19Q9HC21 320 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 ITM2CQ9NQX7 267 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 MRPL17Q9NRX2 175 aaKnown RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 NFKBIL1Q9UBC1 381 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-204ENST00000447182 KCND3Q9UK17 655 aa18.26■□□□□ 0.51
SDCBP-204ENST00000447182 SLC5A10A0PJK1 596 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 FADS2P1A8MWK0 482 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SLITRK5O94991 958 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 GASTP01350 101 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CTSAP10619 480 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CYP2A6P11509 494 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TNFSF8P32971 234 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CNR2P34972 360 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SLC5A12Q1EHB4 618 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 MPEG1Q2M385 716 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF544Q6NX49 715 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 GDPD4Q6W3E5 623 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 COMMD6Q7Z4G1 85 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 KRT73Q86Y46 540 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 RAVER1Q8IY67 606 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TRAM1L1Q8N609 369 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 WDR36Q8NI36 951 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CAPSLQ8WWF8 208 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 PPCDCQ96CD2 204 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 WDR34Q96EX3 536 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SAMD11Q96NU1 681 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 OR2A14Q96R47 310 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ROGDIQ9GZN7 287 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 RACGAP1Q9H0H5 632 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 MYNNQ9NPC7 610 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TAS2R9Q9NYW1 312 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ANGPT4Q9Y264 503 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 GRIP1Q9Y3R0 1128 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 DOCK6Q96HP0 2047 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 H3BQ06 376 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF197O14709 1029 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TSPAN6O43657 245 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 RECKO95980 971 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CKMP06732 381 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 VIPR1P32241 457 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 BDKRB1P46663 353 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SNRPGP62308 76 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 GPR162Q16538 588 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CYP27C1Q4G0S4 372 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 HENMT1Q5T8I9 393 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 RSBN1Q5VWQ0 802 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 FAM71E1Q6IPT2 247 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 BRAT1Q6PJG6 821 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TMC5Q6UXY8 1006 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 PRR23CQ6ZRP0 262 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SPATC1Q76KD6 591 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ARMCX6Q7L4S7 300 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 UBQLNLQ8IYU4 475 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CHST14Q8NCH0 376 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 OR6F1Q8NGZ6 308 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 FOXJ1Q92949 421 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 CIDECQ96AQ7 238 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 MTERF3Q96E29 417 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 WRAP53Q9BUR4 548 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 OR2B2Q9GZK3 357 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms