RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DDX39BQ13838 428 aaKnown RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 GTF2H2Q13888 395 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 UBAP2LQ14157 1087 aaKnown RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
USE1-202ENST00000445667 NR6A1Q15406 480 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 EIF2S3LQ2VIR3 472 aaKnown RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 GRHL2Q6ISB3 625 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 H3F3CQ6NXT2 135 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 GTF2H2CQ6P1K8 395 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 TRMT10CQ7L0Y3 403 aaKnown RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 GOLGA7Q7Z5G4 137 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 PTGR2Q8N8N7 351 aaPredicted RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 UBE2E3Q969T4 207 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 SERINC2Q96SA4 455 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 NPAS2Q99743 824 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.19
USE1-202ENST00000445667 OR51B5Q9H339 312 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 IPPKQ9H8X2 491 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 ACTR8Q9H981 624 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
USE1-202ENST00000445667 MMP25Q9NPA2 562 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 PRTFDC1Q9NRG1 225 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 XPR1Q9UBH6 696 aa13.84□□□□□ -0.19
USE1-202ENST00000445667 MYOCOSA0A1B0GUC4 107 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TCRBV16S1A1N1A0A5B0 115 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TGFBR3LH3BV60 316 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 E2F3O00716 465 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 MAN1A2O60476 641 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 MYBL2P10244 700 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 COL6A2P12110 1019 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 EEF1DP29692 281 aaKnown RBP13.83□□□□□ -0.2
USE1-202ENST00000445667 TNFSF10P50591 281 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 LIM2P55344 173 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TGM3Q08188 693 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 SLC29A2Q14542 456 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TSNAXIP1Q2TAA8 658 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 ACER2Q5QJU3 275 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 LIPJQ5W064 366 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 ADGRD1Q6QNK2 874 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 ZNF793Q6ZN11 406 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 CHSY3Q70JA7 882 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 CLNKQ7Z7G1 428 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 CRLF3Q8IUI8 442 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 SCUBE1Q8IWY4 988 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 KIF2BQ8N4N8 673 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 GRHL3Q8TE85 626 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 ZNF354BQ96LW1 612 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 CSF3RQ99062 836 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 BARD1Q99728 777 aaKnown RBP13.83□□□□□ -0.2
USE1-202ENST00000445667 SORBS1Q9BX66 1292 aaKnown RBP13.83□□□□□ -0.2
USE1-202ENST00000445667 TXLNGYQ9BZA5 131 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TEKT2Q9UIF3 430 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 DAPP1Q9UN19 280 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 RNF11Q9Y3C5 154 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TNPO3Q9Y5L0 923 aaKnown RBP13.83□□□□□ -0.2
USE1-202ENST00000445667 NBASA2RRP1 2371 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 SHANK1Q9Y566 2161 aa13.83□□□□□ -0.2
USE1-202ENST00000445667 TRAV17A0A0B4J275 112 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 SAGE2PA6NJ88 616 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CYR61O00622 381 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CLDN4O14493 209 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CBX6O95503 412 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 ATP5A1P25705 553 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 PPP2R1BP30154 601 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
USE1-202ENST00000445667 AP5B1Q2VPB7 878 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 DEPDC1Q5TB30 811 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CLEC18BQ6UXF7 455 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 RPS27LQ71UM5 84 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 BEST3Q8N1M1 668 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 FAM26EQ8N5C1 309 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 ACOT4Q8N9L9 421 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 SRFBP1Q8NEF9 429 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 ARMC2Q8NEN0 867 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 NFAM1Q8NET5 270 aaPredicted RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 HUS1BQ8NHY5 278 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 ELP5Q8TE02 316 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CMTM7Q96FZ5 175 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 NSUN5Q96P11 429 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 KCNC2Q96PR1 638 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 MTERF1Q99551 399 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 MAPKAP1Q9BPZ7 522 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 EPB41L4BQ9H329 900 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CDCP1Q9H5V8 836 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 PNO1Q9NRX1 252 aaKnown RBP13.82□□□□□ -0.2
USE1-202ENST00000445667 KCMF1Q9P0J7 381 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 MMACHCQ9Y4U1 282 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 CLDN16Q9Y5I7 305 aa13.82□□□□□ -0.2
USE1-202ENST00000445667 OR5H15A6NDH6 313 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 OR7A17O14581 309 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms