RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR2T11Q8NH01 316 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MALT1Q9UDY8 824 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 TMA7Q9Y2S6 64 aaKnown RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 SH3D21A4FU49 640 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 DLGAP1O14490 977 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ARF5P84085 180 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF691Q5VV52 312 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ADNP2Q6IQ32 1131 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MARCH9Q86YJ5 346 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MMAAQ8IVH4 418 aaKnown RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 SLC5A8Q8N695 610 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 UHRF1Q96T88 793 aaPredicted RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 SPHK2Q9NRA0 654 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 NDOR1Q9UHB4 597 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 SMAD6O43541 496 aaKnown RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 KHDRBS3O75525 346 aaKnown RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 FAM189BP81408 668 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 LRRC32Q14392 662 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 RGNQ15493 299 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 TSSK6Q9BXA6 273 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 THSD7AQ9UPZ6 1657 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 GPR39O43194 453 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 NUAK1O60285 661 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 HLA-DQA2P01906 255 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 PSKH1P11801 424 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CD9P21926 228 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 GUCA1AP43080 201 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 ATP12AP54707 1039 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CYP27C1Q4G0S4 372 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 VITQ6UXI7 678 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 SETD7Q8WTS6 366 aaKnown RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 SNX33Q8WV41 574 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 KAT2AQ92830 837 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 GFM1Q96RP9 751 aaKnown RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 BRF2Q9HAW0 419 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 POLE4Q9NR33 117 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CMAHPQ9Y471 501 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 RAB36O95755 333 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 YES1P07947 543 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CDH11P55287 796 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 MAD2L1BPQ15013 274 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 SMARCD3Q6STE5 483 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 ADGRD2Q7Z7M1 963 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CELF5Q8N6W0 485 aaKnown RBP15.99■□□□□ 0.15
TCOF1-206ENST00000445265 OR13F1Q8NGS4 319 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 EPYCQ99645 322 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 KATNBL1Q9H079 304 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 CPNE5Q9HCH3 593 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 TNFRSF10DQ9UBN6 386 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 USP22Q9UPT9 525 aa15.99■□□□□ 0.15
TCOF1-206ENST00000445265 H7C0S8 307 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 FGF18O76093 207 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SHMT2P34897 504 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 CLCN7P51798 805 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 COX18Q8N8Q8 333 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 KLHDC9Q8NEP7 349 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 TRMT61BQ9BVS5 477 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 IFT27Q9BW83 186 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 OR51V1Q9H2C8 321 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 STOX2Q9P2F5 926 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 PMF1-BGLAPU3KQ54 211 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 E7EQ34 232 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 KIAA0513O60268 411 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 JRKO75564 520 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 OXSR1O95747 527 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 LCKP06239 509 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 EMX1Q04741 257 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF155Q12901 538 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 GINS1Q14691 196 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 IDNKQ5T6J7 187 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SLC8B1Q6J4K2 584 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 PIWIL3Q7Z3Z3 882 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 FAM129CQ86XR2 697 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 TMC8Q8IU68 726 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF689Q96CS4 500 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SYNDIG1Q9H7V2 258 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 CFAP20Q9Y6A4 193 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 ENPP4Q9Y6X5 453 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SSC5DA1L4H1 1573 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 PCGF2P35227 344 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 CSNK1DP48730 415 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SELENOWP63302 87 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SPHARQ15513 63 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF648Q5T619 568 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SLC36A4Q6YBV0 504 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 GET4Q7L5D6 327 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 TRNT1Q96Q11 434 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 NAA50Q9GZZ1 169 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 LHX3Q9UBR4 397 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 PCDHGB1Q9Y5G3 927 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 GTPBP1O00178 669 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 MATN1P21941 496 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 NUP62P37198 522 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 SUZ12Q15022 739 aaKnown RBP15.98■□□□□ 0.15
TCOF1-206ENST00000445265 XKR7Q5GH72 579 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 OR7G3Q8NG95 312 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms