RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 RPS18P62269 152 aaKnown RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 CBX1P83916 185 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 EXOSC7Q15024 291 aaKnown RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 LIPJQ5W064 366 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF776Q68DI1 518 aaPredicted RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 OR7E24Q6IFN5 339 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 TRMT1LQ7Z2T5 733 aaKnown RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 C5orf24Q7Z6I8 188 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 ZC3H3Q8IXZ2 948 aaKnown RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 RCOR2Q8IZ40 523 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 BHLHE23Q8NDY6 225 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 LARP4BQ92615 738 aaKnown RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 TANKQ92844 425 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 COQ8BQ96D53 544 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 MARK4Q96L34 752 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 PLIN2Q99541 437 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 PANK2Q9BZ23 570 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 EBF3Q9H4W6 596 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 GDAP2Q9NXN4 497 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 BARHL2Q9NY43 387 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 OR6C2Q9NZP2 312 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 P2RX2Q9UBL9 471 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 PCSK1NQ9UHG2 260 aa4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF490Q9ULM2 529 aaPredicted RBP4.79□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF804BA4D1E1 1349 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 KIAA1217Q5T5P2 1943 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 GOLGA8OA6NCC3 632 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF732B4DXR9 585 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 GOLGA8NF8WBI6 632 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 DNALI1O14645 258 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 MED7O43513 233 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CTAG2O75638 210 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PDE9AO76083 593 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 MBD3O95983 291 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 IGHEP01854 428 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 UQCRFS1P1P0C7P4 283 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CYP19A1P11511 503 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 GP9P14770 177 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF23P17027 643 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ITGA2P17301 1181 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CEBPBP17676 345 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 TNFRSF1BP20333 461 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 RBMS1P29558 406 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 AXLP30530 894 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 AHRP35869 848 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PPT1P50897 306 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PRRX1P54821 245 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 MLLT10P55197 1068 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ABATP80404 500 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 BNC1Q01954 994 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 MFGE8Q08431 387 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 SELPLGQ14242 412 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 MEF2DQ14814 521 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PTGR1Q14914 329 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 OPCMLQ14982 345 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 HEPACAMQ14CZ8 416 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 TRIP10Q15642 601 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 TPD52L1Q16890 204 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CORO6Q6QEF8 472 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 EFL1Q7Z2Z2 1120 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CBWD2Q8IUF1 395 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ODF3L1Q8IXM7 274 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 DCP1BQ8IZD4 617 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 TTC5Q8N0Z6 440 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PGBD5Q8N414 524 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 OR6M1Q8NGM8 313 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 OR52N5Q8NH56 324 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CD99L2Q8TCZ2 262 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PHLDA1Q8WV24 401 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PIK3R3Q92569 461 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 DPF1Q92782 380 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 EMG1Q92979 244 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 DHTKD1Q96HY7 919 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ABHD8Q96I13 439 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 C3orf30Q96M34 536 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 VPS35Q96QK1 796 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 NEURL2Q9BR09 285 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CRNKL1Q9BZJ0 848 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 SPRTNQ9H040 489 aaPredicted RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 RNF121Q9H920 327 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 FN3KRPQ9HA64 309 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 PELI2Q9HAT8 420 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 OLFML3Q9NRN5 406 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 AGPAT5Q9NUQ2 364 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 RAB20Q9NX57 234 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 LHX3Q9UBR4 397 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 BAIAP2L1Q9UHR4 511 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CRLS1Q9UJA2 301 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms