RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ABI3Q9P2A4 366 aa19.76■□□□□ 0.75
CDKN3-204ENST00000442975 ZNF180Q9UJW8 692 aa19.76■□□□□ 0.75
CDKN3-204ENST00000442975 RP1L1Q8IWN7 2480 aaPredicted RBP19.76■□□□□ 0.75
CDKN3-204ENST00000442975 IGKV3D-11A0A0A0MRZ8 115 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 TCRBV16S1A1N1A0A5B0 115 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 OR5H15A6NDH6 313 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 A8MUA0 341 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SAP18O00422 153 aaKnown RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 AGFG2O95081 481 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SIX3O95343 332 aaPredicted RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 ABHD2P08910 425 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 CASP2P42575 452 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SLC13A2Q13183 592 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 TSNAXIP1Q2TAA8 658 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 ACER2Q5QJU3 275 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 FHL5Q5TD97 284 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 FAM180AQ6UWF9 173 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 TRMT10CQ7L0Y3 403 aaKnown RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 GOLGA7Q7Z5G4 137 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 CLNKQ7Z7G1 428 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 CRLF3Q8IUI8 442 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 BEST3Q8N1M1 668 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 KIF2BQ8N4N8 673 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SLC5A8Q8N695 610 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 OR7G3Q8NG95 312 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SUN3Q8TAQ9 357 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 ZNF473Q8WTR7 871 aaKnown RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 CSF3RQ99062 836 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 PRTFDC1Q9NRG1 225 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 MRPS33Q9Y291 106 aaKnown RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 MMACHCQ9Y4U1 282 aa19.75■□□□□ 0.75
CDKN3-204ENST00000442975 TNPO3Q9Y5L0 923 aaKnown RBP19.75■□□□□ 0.75
CDKN3-204ENST00000442975 SAGE2PA6NJ88 616 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 RTCAO00442 366 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 KLK8O60259 260 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 TGFB1P01137 390 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 RBP1P09455 135 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 EEF1DP29692 281 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 SERPINB1P30740 379 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 SSR2P43308 183 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 PIK3CGP48736 1102 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ST13P50502 369 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 HNRNPFP52597 415 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 LIM2P55344 173 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 SRSF1Q07955 248 aaKnown RBP eCLIP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 GTF2H2Q13888 395 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ELOAQ14241 798 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 EIF2S3LQ2VIR3 472 aaKnown RBP19.74■□□□□ 0.75
CDKN3-204ENST00000442975 GTF2H2CQ6P1K8 395 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 LAS2Q8IYD9 372 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 RNF175Q8N4F7 328 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 TMEM52Q8NDY8 209 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 PRR7Q8TB68 274 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 HAS2Q92819 552 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 PHF21BQ96EK2 531 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ZNF354BQ96LW1 612 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ROGDIQ9GZN7 287 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 RNF32Q9H0A6 362 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ANKRD10Q9NXR5 420 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 SCN3AQ9NY46 2000 aa19.74■□□□□ 0.75
CDKN3-204ENST00000442975 ANKUB1A6NFN9 424 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 CLDN4O14493 209 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 RIPK2O43353 540 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 SMIM24O75264 130 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 MYO1DO94832 1006 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 SNRPAP09012 282 aaKnown RBP19.73■□□□□ 0.75
CDKN3-204ENST00000442975 FAM153BP0C7A2 387 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 RAP1GDS1P52306 607 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 E2F2Q14209 437 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 RCN2Q14257 317 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 PCBP2Q15366 365 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDKN3-204ENST00000442975 MEP1AQ16819 746 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 FAM153CQ494X1 144 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 TMEM35AQ53FP2 167 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 ZNF793Q6ZN11 406 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 CHSY3Q70JA7 882 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 UBE3DQ7Z6J8 389 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 SCUBE1Q8IWY4 988 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 SRFBP1Q8NEF9 429 aaKnown RBP19.73■□□□□ 0.75
CDKN3-204ENST00000442975 HUS1BQ8NHY5 278 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 OR51B5Q9H339 312 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 IPPKQ9H8X2 491 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 PNO1Q9NRX1 252 aaKnown RBP19.73■□□□□ 0.75
CDKN3-204ENST00000442975 DAPP1Q9UN19 280 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 COL12A1Q99715 3063 aa19.73■□□□□ 0.75
CDKN3-204ENST00000442975 CLEC18AA5D8T8 446 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 MAN1A2O60476 641 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 PPP2R1BP30154 601 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 PHEXP78562 749 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 CPSF6Q16630 551 aaKnown RBP eCLIP19.72■□□□□ 0.75
CDKN3-204ENST00000442975 TEX35Q5T0J7 233 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 LGSNQ5TDP6 509 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 KHDRBS2Q5VWX1 349 aaKnown RBP19.72■□□□□ 0.75
CDKN3-204ENST00000442975 CLEC18BQ6UXF7 455 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 ZNF595Q8IYB9 648 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 BCORP1Q8N888 145 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 CLEC18CQ8NCF0 446 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 CMTM7Q96FZ5 175 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 MTERF1Q99551 399 aaKnown RBP19.72■□□□□ 0.75
CDKN3-204ENST00000442975 CENPKQ9BS16 269 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms