RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 NECTIN3Q9NQS3 549 aa20.76■□□□□ 0.91
HDLBP-220ENST00000442730 ZNF358Q9NW07 568 aa20.76■□□□□ 0.91
HDLBP-220ENST00000442730 CPSF2Q9P2I0 782 aaKnown RBP20.76■□□□□ 0.91
HDLBP-220ENST00000442730 MMACHCQ9Y4U1 282 aa20.76■□□□□ 0.91
HDLBP-220ENST00000442730 USP9YO00507 2555 aaPredicted RBP20.76■□□□□ 0.91
HDLBP-220ENST00000442730 TRAV17A0A0B4J275 112 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 EXOC1LA0A1B0GW35 172 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 A8MUI8 341 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 TRIM49D1C9J1S8 452 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 TNFRSF8P28908 595 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 SERPINB1P30740 379 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 MTTPP55157 894 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 RAB38P57729 211 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 TGM3Q08188 693 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 PCBP2Q15366 365 aaKnown RBP eCLIP20.75■□□□□ 0.919e-7■□□□□ 8.7
HDLBP-220ENST00000442730 FCRLBQ6BAA4 426 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 TRMT10CQ7L0Y3 403 aaKnown RBP20.75■□□□□ 0.91
HDLBP-220ENST00000442730 UBE3DQ7Z6J8 389 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 OR7G3Q8NG95 312 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 OR1N1Q8NGS0 311 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 ADAMTS18Q8TE60 1221 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 KCNC2Q96PR1 638 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 NPAS2Q99743 824 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 COPS7BQ9H9Q2 264 aaPredicted RBP20.75■□□□□ 0.91
HDLBP-220ENST00000442730 KCNK13Q9HB14 408 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 ANGPTL3Q9Y5C1 460 aa20.75■□□□□ 0.91
HDLBP-220ENST00000442730 OR5H15A6NDH6 313 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 SAGE2PA6NJ88 616 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 SIX3O95343 332 aaPredicted RBP20.74■□□□□ 0.91
HDLBP-220ENST00000442730 CBX6O95503 412 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 FAM153BP0C7A2 387 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 MYBL2P10244 700 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 PCNAP12004 261 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 HNRNPFP52597 415 aaKnown RBP20.74■□□□□ 0.91
HDLBP-220ENST00000442730 FAM153CQ494X1 144 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 ACER2Q5QJU3 275 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 RPUSD3Q6P087 351 aaKnown RBP20.74■□□□□ 0.91
HDLBP-220ENST00000442730 CRLF3Q8IUI8 442 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 CYP4X1Q8N118 509 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 BEST3Q8N1M1 668 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 EIF1ADQ8N9N8 165 aaKnown RBP20.74■□□□□ 0.91
HDLBP-220ENST00000442730 FAM47BQ8NA70 645 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 TMEM52Q8NDY8 209 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 ARMC2Q8NEN0 867 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 GRHL3Q8TE85 626 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 PRDM7Q9NQW5 492 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 AGPAT4Q9NRZ5 378 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 STMN3Q9NZ72 180 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 XPR1Q9UBH6 696 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 CLDN16Q9Y5I7 305 aa20.74■□□□□ 0.91
HDLBP-220ENST00000442730 SPTAN1Q13813 2472 aaKnown RBP20.73■□□□□ 0.91
HDLBP-220ENST00000442730 SCN2AQ99250 2005 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 DOPEY2Q9Y3R5 2298 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 TGFBR3LH3BV60 316 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 E2F3O00716 465 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 RIPK2O43353 540 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 MAN1A2O60476 641 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 RBP1P09455 135 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 COL6A2P12110 1019 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 GCAP28676 217 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 LIM2P55344 173 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 GTF2H2Q13888 395 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 TSNAXIP1Q2TAA8 658 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 TMEM35AQ53FP2 167 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 GTF2H2CQ6P1K8 395 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 METTL2BQ6P1Q9 378 aaKnown RBP20.73■□□□□ 0.91
HDLBP-220ENST00000442730 ZNF793Q6ZN11 406 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 GOLGA7Q7Z5G4 137 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 KIF2BQ8N4N8 673 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 PTGR2Q8N8N7 351 aaPredicted RBP20.73■□□□□ 0.91
HDLBP-220ENST00000442730 ELP5Q8TE02 316 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 ZNF354BQ96LW1 612 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 CSF3RQ99062 836 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 TXLNGYQ9BZA5 131 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDLBP-220ENST00000442730 ANKZF1Q9H8Y5 726 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 ACTR8Q9H981 624 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 DAPP1Q9UN19 280 aa20.73■□□□□ 0.91
HDLBP-220ENST00000442730 TNPO3Q9Y5L0 923 aaKnown RBP20.73■□□□□ 0.91
HDLBP-220ENST00000442730 CYR61O00622 381 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 SCELO95171 688 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 PIK3CGP48736 1102 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 HSD17B7P56937 341 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 INAQ16352 499 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 KHDRBS2Q5VWX1 349 aaKnown RBP20.72■□□□□ 0.91
HDLBP-220ENST00000442730 LIPJQ5W064 366 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 MYLK4Q86YV6 388 aaPredicted RBP20.72■□□□□ 0.91
HDLBP-220ENST00000442730 ZNF595Q8IYB9 648 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 SLC5A8Q8N695 610 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 SRFBP1Q8NEF9 429 aaKnown RBP20.72■□□□□ 0.91
HDLBP-220ENST00000442730 NFAM1Q8NET5 270 aaPredicted RBP20.72■□□□□ 0.91
HDLBP-220ENST00000442730 HUS1BQ8NHY5 278 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 CMTM7Q96FZ5 175 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 TBCDQ9BTW9 1192 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 ROGDIQ9GZN7 287 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 DMRT3Q9NQL9 472 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 PRTFDC1Q9NRG1 225 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 MRPS33Q9Y291 106 aaKnown RBP20.72■□□□□ 0.91
HDLBP-220ENST00000442730 TSC22D4Q9Y3Q8 395 aa20.72■□□□□ 0.91
HDLBP-220ENST00000442730 RTCAO00442 366 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms