RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 DUSP28Q4G0W2 176 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FAM74A3Q4VXF1 159 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 INTS6LQ5JSJ4 861 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 TMEM198Q66K66 360 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RPL13AP3Q6NVV1 102 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SPESP1Q6UW49 350 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RBMS3Q6XE24 437 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 USP30Q70CQ3 517 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 AHSA2Q719I0 299 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 VSIG10LQ86VR7 867 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PAQR7Q86WK9 346 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PSTKQ8IV42 348 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 C10orf107Q8IVU9 208 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRSS33Q8NF86 280 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 OR4Q3Q8NH05 313 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 THAP6Q8TBB0 222 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PHOSPHO1Q8TCT1 267 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HMGB4Q8WW32 186 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KAT2AQ92830 837 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF845Q96IR2 970 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 RNF170Q96K19 258 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KLHL15Q96M94 604 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 IFT27Q9BW83 186 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SUCNR1Q9BXA5 334 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 AMNQ9BXJ7 453 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLIRPQ9GZT3 109 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 HDHD2Q9H0R4 259 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ALX4Q9H161 411 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GAREM1Q9H706 876 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GORASP2Q9H8Y8 452 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CCNB1IP1Q9NPC3 277 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CRTAC1Q9NQ79 661 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FAM118AQ9NWS6 357 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TAS2R3Q9NYW6 316 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 VAPAQ9P0L0 249 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 OPTCQ9UBM4 332 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A14Q9Y267 594 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NCKAP1Q9Y2A7 1128 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ACOT9Q9Y305 439 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KLF2Q9Y5W3 355 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 MYH9P35579 1960 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 SSC5DA1L4H1 1573 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CACNA1CQ13936 2221 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 A0A1W2PPC1 479 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CBY3A6NI87 242 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MEIS3P2A8K0S8 358 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 EFCAB7A8K855 629 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRR33A8MZF0 331 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 L7N2F9 121 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC1A7O00341 560 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PPEF2O14830 753 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PHYHO14832 338 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FFAR3O14843 346 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GPR42O15529 346 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LCMT2O60294 686 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CIDEAO60543 219 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GADD45GO95257 159 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRAMEF1O95521 474 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MOCS2O96007 188 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 LRG1P02750 347 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ADH1AP07327 375 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HMBSP08397 361 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 QDPRP09417 244 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FAM86B2P0C5J1 330 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SPP1P10451 314 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF35P13682 527 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF25P17030 456 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 STOMP27105 288 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MAT2AP31153 395 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GGT5P36269 586 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TGFBR1P36897 503 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GABRB2P47870 512 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NR0B1P51843 470 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GP2P55259 537 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GABARAPL2P60520 117 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NFKB2Q00653 900 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 EMX1Q04741 257 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 SOX4Q06945 474 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 RIPPLY1Q0D2K3 151 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 IRF4Q15306 451 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RBMS2Q15434 407 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ATP6AP1Q15904 470 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RNF151Q2KHN1 245 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SPDYE7PQ495Y7 208 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FAM98BQ52LJ0 330 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CYBRD1Q53TN4 286 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 INO80DQ53TQ3 878 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 Q5PR19 223 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 STXBP5Q5T5C0 1151 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FKBP1CQ5VVH2 108 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MEDAGQ5VYS4 303 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CNKSR3Q6P9H4 555 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TFAP2EQ6VUC0 442 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ETV3LQ6ZN32 361 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PDZD4Q76G19 769 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 NLRC3Q7RTR2 1065 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TAC4Q86UU9 113 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TMEM17Q86X19 198 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CPNE8Q86YQ8 564 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms