RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 GNSP15586 552 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SDC1P18827 310 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 IL12AP29459 219 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GNG2P59768 71 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TAGLNQ01995 201 aaKnown RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 COQ5Q5HYK3 327 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 FAM122CQ6P4D5 195 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SFTPA2Q8IWL1 248 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 C1orf52Q8N6N3 182 aaKnown RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GALNT6Q8NCL4 622 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 OR10G6Q8NH81 332 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TBC1D15Q8TC07 691 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 FCRL1Q96LA6 429 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TSSK3Q96PN8 268 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 OR51B5Q9H339 312 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SCPEP1Q9HB40 452 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ACAD8Q9UKU7 415 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 RAB26Q9ULW5 256 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 HEMK1Q9Y5R4 338 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 IGKV1-8A0A0C4DH67 115 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 A0A1B0GTW7 788 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TRBC2A0A5B9 178 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 FEZF1A0PJY2 475 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 FAM172BPA6NC97 362 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 OR6C74A6NCV1 312 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 YY2O15391 372 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CFLARO15519 480 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CLDN8P56748 225 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SRSF5Q13243 272 aaKnown RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TLR1Q15399 786 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 MOGQ16653 247 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 PMS2CLQ68D20 193 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 RNF111Q6ZNA4 994 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TMEM26Q6ZUK4 368 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ULK2Q8IYT8 1036 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ANKRD53Q8N9V6 530 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF548Q8NEK5 533 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GPR156Q8NFN8 814 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TTLQ8NG68 377 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CLHC1Q8NHS4 586 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CHTF18Q8WVB6 975 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 RASSF5Q8WWW0 418 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 VPS33AQ96AX1 596 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ROPN1LQ96C74 230 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SLC6A20Q9NP91 592 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 LEF1Q9UJU2 399 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 PRPF19Q9UMS4 504 aaKnown RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ENTPD2Q9Y5L3 495 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 KNL1Q8NG31 2342 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 A0A1B0GVT2 93 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GSAPA4D1B5 854 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 POLR1CO15160 346 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 NDUFA2O43678 99 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 JRKO75564 520 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ANXA6P08133 673 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TACR1P25103 407 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ZFP36L2P47974 494 aaKnown RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CYP4F2P78329 520 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 STK11Q15831 433 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GALNT18Q6P9A2 607 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 HACD2Q6Y1H2 254 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 BNC2Q6ZN30 1099 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 VN1R5Q7Z5H4 357 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 RETREG3Q86VR2 466 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 PLD3Q8IV08 490 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 MAML2Q8IZL2 1156 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 TAMM41Q96BW9 452 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 C11orf24Q96F05 449 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-201ENST00000442201 CLPTM1LQ96KA5 538 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 EBPLQ9BY08 206 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 S100A14Q9HCY8 104 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SLC52A3Q9NQ40 469 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 ACTR10Q9NZ32 417 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 AHSPQ9NZD4 102 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SUSD2Q9UGT4 822 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 GNG14A0A1W2PPG7 69 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 KPNA4O00629 521 aaPredicted RBP7.71□□□□□ -1.17
CCDC39-201ENST00000442201 CIB2O75838 187 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ANXA4P09525 319 aaPredicted RBP7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ALOX5P09917 674 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 PRKACAP17612 351 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 PRPS1L1P21108 318 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 GSTM2P28161 218 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 TIA1P31483 386 aaKnown RBP eCLIP7.71□□□□□ -1.17
CCDC39-201ENST00000442201 PSME3P61289 254 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 GNA13Q14344 377 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 KIAA1614Q5VZ46 1190 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF425Q6IV72 752 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 TMEM105Q8N8V8 129 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF486Q96H40 463 aaPredicted RBP7.71□□□□□ -1.17
CCDC39-201ENST00000442201 DOK1Q99704 481 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 MS4A8Q9BY19 250 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ERVMER34-1Q9H9K5 563 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 HRASLS2Q9NWW9 162 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 PCDHGA2Q9Y5H1 932 aa7.71□□□□□ -1.17
CCDC39-201ENST00000442201 ABCA7Q8IZY2 2146 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms