RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MLIPQ5VWP3 458 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 ZNF782Q6ZMW2 699 aaPredicted RBP16.12■□□□□ 0.17
PMS1-213ENST00000441310 SLC5A8Q8N695 610 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 SIDT2Q8NBJ9 832 aaKnown RBP16.12■□□□□ 0.17
PMS1-213ENST00000441310 WBP2Q969T9 261 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 PPP3R2Q96LZ3 170 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 GPR137Q96N19 417 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 ARNT2Q9HBZ2 717 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 RBFOX1Q9NWB1 397 aaKnown RBP16.12■□□□□ 0.17
PMS1-213ENST00000441310 MED16Q9Y2X0 877 aa16.12■□□□□ 0.17
PMS1-213ENST00000441310 ZFP37Q9Y6Q3 630 aaPredicted RBP16.12■□□□□ 0.17
PMS1-213ENST00000441310 F5H5T6 163 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 KELP23276 732 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 PSMA1P25786 263 aaKnown RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 SSTR2P30874 369 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 SGSHP51688 502 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ANGPT1Q15389 498 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 TAF12Q16514 161 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 NDUFAF5Q5TEU4 345 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ARRDC2Q8TBH0 407 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ST8SIA4Q92187 359 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 ZNF222Q9UK12 451 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 DIMT1Q9UNQ2 313 aaKnown RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 RAF1P04049 648 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 AQP1P29972 269 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 SERINC3Q13530 473 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 EIF4HQ15056 248 aaKnown RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 MZT2BQ6NZ67 158 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 PLPP6Q8IY26 295 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 LINC00518Q8N0U6 118 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 TMEM203Q969S6 136 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 MTFMTQ96DP5 389 aaKnown RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 RNF208Q9H0X6 261 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ORC5O43913 435 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 PRKAR1AP10644 381 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 HTR7P34969 479 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ATP5C1P36542 298 aaKnown RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 VEGFBP49765 207 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 EPHA5P54756 1037 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ITGA1P56199 1179 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 RIN1Q13671 783 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 FCN2Q15485 313 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 GOLGA7Q7Z5G4 137 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 Q8N402 240 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 OR4L1Q8NH43 312 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
PMS1-213ENST00000441310 EEF1AKMT1Q8WVE0 214 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 TAPBPLQ9BX59 468 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 CDCP1Q9H5V8 836 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 RDH8Q9NYR8 311 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 TNFRSF10DQ9UBN6 386 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 CLEC2DQ9UHP7 191 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 ING4Q9UNL4 249 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 FRMPD3Q5JV73 1810 aa16.11■□□□□ 0.17
PMS1-213ENST00000441310 GREB1Q4ZG55 1949 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 WASH4PA8MWX3 477 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 INMT-MINDY4F8WBC2 141 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 LYRM1O43325 122 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 LRATO95237 230 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 FCER2P06734 321 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 KDELR2P33947 212 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.1■□□□□ 0.17
PMS1-213ENST00000441310 EXOSC2Q13868 293 aaKnown RBP16.1■□□□□ 0.17
PMS1-213ENST00000441310 GRK1Q15835 563 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 KLHL12Q53G59 568 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 FAM181AQ8N9Y4 354 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 AP2M1Q96CW1 435 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 LINGO1Q96FE5 620 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 VN1R3Q9BXE9 311 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 C1QTNF3Q9BXJ4 246 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 CLMPQ9H6B4 373 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 SCPEP1Q9HB40 452 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 POPDC3Q9HBV1 291 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 GPRC5BQ9NZH0 403 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 CPNE7Q9UBL6 633 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 WNT9AO14904 365 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 NIPSNAP2O75323 286 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 KLKB1P03952 638 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 S100A3P33764 101 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 RGRP47804 291 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 INPP1P49441 399 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 STC1P52823 247 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 PLD1Q13393 1074 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 LINGO4Q6UY18 593 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 OR9Q1Q8NGQ5 310 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 CEP76Q8TAP6 659 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 CREB3L4Q8TEY5 395 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 NIPSNAP1Q9BPW8 284 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 COMMD3Q9UBI1 195 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 RPS6KA6Q9UK32 745 aa16.1■□□□□ 0.17
PMS1-213ENST00000441310 IGLV3-10A0A075B6K4 115 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 IQCMA0A1B0GVH7 501 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 ZNF670-ZNF695F2Z2N8 137 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CBX4O00257 560 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 OR7A17O14581 309 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 FKTNO75072 461 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CBX5P45973 191 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 GRM7Q14831 915 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms