RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 SIAEQ9HAT2 523 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 C14orf105Q9NVL8 296 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 ASF1BQ9NVP2 202 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 BFARQ9NZS9 450 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 SUCOQ9UBS9 1254 aaKnown RBP5.74□□□□□ -1.49
PTPRR-204ENST00000440835 RSL24D1Q9UHA3 163 aaKnown RBP5.74□□□□□ -1.49
PTPRR-204ENST00000440835 CDC14AQ9UNH5 594 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 MED13Q9UHV7 2174 aa5.74□□□□□ -1.49
PTPRR-204ENST00000440835 ANKRD12Q6UB98 2062 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PIKFYVEQ9Y2I7 2098 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 USP9XQ93008 2570 aaPredicted RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MAGEB16A2A368 324 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MROH6A6NGR9 719 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SDR42E2A6NKP2 422 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TMCC2O75069 709 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CBSLP0DN79 551 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ICAM2P13598 275 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CBSP35520 551 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 HSD17B2P37059 387 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 NPY2RP49146 381 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SLC18A1P54219 525 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 RPS3AP61247 264 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 RAC1P63000 192 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PLIN5Q00G26 463 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MRPL49Q13405 166 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 NAB1Q13506 487 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SEMA3AQ14563 771 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TRIP10Q15642 601 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 EIF2S3LQ2VIR3 472 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SYTL3Q4VX76 610 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MLIPQ5VWP3 458 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 C1QL3Q5VWW1 255 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ANKRD22Q5VYY1 191 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 KCTD11Q693B1 232 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 AAGABQ6PD74 315 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TTC23LQ6PF05 361 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 FAM180AQ6UWF9 173 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 AMIGO2Q86SJ2 522 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TDRPQ86YL5 185 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 DCUN1D3Q8IWE4 304 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 LRRN4Q8WUT4 740 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 FAR1Q8WVX9 515 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CDKN2AIPNLQ96HQ2 116 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 BIRC8Q96P09 236 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 BTBD9Q96Q07 612 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CHST11Q9NPF2 352 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PSMC3IPQ9P2W1 217 aaPredicted RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ZC3H7BQ9UGR2 993 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ASF1AQ9Y294 204 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PCDHGB6Q9Y5F9 930 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MAGED1Q9Y5V3 778 aaPredicted RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CFAP20Q9Y6A4 193 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 IGLV3-12A0A075B6K2 115 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ARPC4-TTLL3A0A0A6YYG9 625 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 IQANK1A0A1B0GTG1 560 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ZNF839A8K0R7 811 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 E2F3O00716 465 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CRYABP02511 175 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 UMODP07911 640 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 INHBAP08476 426 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TCEA1P23193 301 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PSMB4P28070 264 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ELK3P41970 407 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MASP1P48740 699 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SERPINB9P50453 376 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CDK9P50750 372 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ACVR1Q04771 509 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SLC9A5Q14940 896 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SF3B4Q15427 424 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PHKG1Q16816 387 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 PTCHD3Q3KNS1 767 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CASC4Q6P4E1 433 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 AFTPHQ6ULP2 937 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CUZD1Q86UP6 607 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ANKMY2Q8IV38 441 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SLC44A2Q8IWA5 706 aaPredicted RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CCDC116Q8IYX3 515 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CISD2Q8N5K1 135 aaKnown RBP5.73□□□□□ -1.49
PTPRR-204ENST00000440835 SLC26A7Q8TE54 656 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 CNBD2Q96M20 576 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MFRPQ9BY79 579 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 MAP10Q9P2G4 905 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TAGLN3Q9UI15 199 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 DOPEY1Q5JWR5 2465 aa5.73□□□□□ -1.49
PTPRR-204ENST00000440835 TRAV17A0A0B4J275 112 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 FAM237BA0A1B0GVD1 139 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ANKRD34BA5PLL1 514 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 A6NL46 340 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 POC1B-GALNT4F8VUJ3 575 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SOCS6O14544 535 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PFDN6O15212 129 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 BMP10O95393 424 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 METTL18O95568 372 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 MYL2P10916 166 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PGAM1P18669 254 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 DNAJA1P31689 397 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CA5AP35218 305 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 GLRBP48167 497 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms