RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OR4D2P58180 307 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 VSNL1P62760 191 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 AP2B1P63010 937 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 FOXK1P85037 733 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 ACTN3Q08043 901 aaPredicted RBP22.21■■□□□ 1.15
VARS-217ENST00000440048 MFAP5Q13361 173 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 BTBD16Q32M84 506 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 TMEM35AQ53FP2 167 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 PAPD4Q6PIY7 484 aaKnown RBP22.21■■□□□ 1.15
VARS-217ENST00000440048 CHSY3Q70JA7 882 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 LCA5Q86VQ0 697 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 CNPY4Q8N129 248 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 L3MBTL4Q8NA19 623 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 SRFBP1Q8NEF9 429 aaKnown RBP22.21■■□□□ 1.15
VARS-217ENST00000440048 ACMSDQ8TDX5 336 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 CMTM7Q96FZ5 175 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 NSUN5Q96P11 429 aaKnown RBP22.21■■□□□ 1.15
VARS-217ENST00000440048 KCNC2Q96PR1 638 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 LMF1Q96S06 567 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 EPS8L2Q9H6S3 715 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 ZBTB26Q9HCK0 441 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 PRDM9Q9NQV7 894 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 TSC22D4Q9Y3Q8 395 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 CPAMD8Q8IZJ3 1885 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 A8MT66 165 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 H0YIV9 168 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 SLU7O95391 586 aaKnown RBP22.2■■□□□ 1.14
VARS-217ENST00000440048 PYGBP11216 843 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 MAOAP21397 527 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 PIK3CBP42338 1070 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 CPSF6Q16630 551 aaKnown RBP eCLIP22.2■■□□□ 1.14
VARS-217ENST00000440048 DEPDC1Q5TB30 811 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 KHDRBS2Q5VWX1 349 aaKnown RBP22.2■■□□□ 1.14
VARS-217ENST00000440048 ZNF793Q6ZN11 406 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 Q6ZS92 163 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 OR52B6Q8NGF0 335 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 PPP4R1Q8TF05 950 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 ATP6V1E2Q96A05 226 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 CDK15Q96Q40 435 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 MTERF1Q99551 399 aaKnown RBP22.2■■□□□ 1.14
VARS-217ENST00000440048 LPAR4Q99677 370 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 TBCDQ9BTW9 1192 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 ROGDIQ9GZN7 287 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 OR51B5Q9H339 312 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 DMRT3Q9NQL9 472 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 NECTIN3Q9NQS3 549 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 PLAAQ9Y263 795 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 MMACHCQ9Y4U1 282 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 HECTD1Q9ULT8 2610 aa22.2■■□□□ 1.14
VARS-217ENST00000440048 IGKV3D-11A0A0A0MRZ8 115 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 A0A1W2PPM1 405 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 ESPNB1AK53 854 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 SAP18O00422 153 aaKnown RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 RTCAO00442 366 aaKnown RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 CLDN9O95484 217 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 RPS17P08708 135 aaKnown RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 ATP5A1P25705 553 aaKnown RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 SLCO1A2P46721 670 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 CCNG1P51959 295 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 LIM2P55344 173 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 EXT1Q16394 746 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 RPS27LQ71UM5 84 aaKnown RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 TMEM52Q8NDY8 209 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 CPT1CQ8TCG5 803 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 ADAMTS18Q8TE60 1221 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 MIB2Q96AX9 1013 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 REPS1Q96D71 796 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 NTMT1Q9BV86 223 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 ILKAPQ9H0C8 392 aaPredicted RBP22.19■■□□□ 1.14
VARS-217ENST00000440048 DAPP1Q9UN19 280 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 SHANK1Q9Y566 2161 aa22.19■■□□□ 1.14
VARS-217ENST00000440048 TCRBV16S1A1N1A0A5B0 115 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 FOXO6A8MYZ6 492 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 UQCRHP07919 91 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 HSD17B3P37058 310 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 ARL1P40616 181 aaPredicted RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 HNRNPFP52597 415 aaKnown RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 RPS13P62277 151 aaKnown RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 TRAF3Q13114 568 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 ZRSR2Q15696 482 aaKnown RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 AP5B1Q2VPB7 878 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 PRR30Q53SZ7 412 aaPredicted RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 B3GNTL1Q67FW5 361 aaPredicted RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 CUZD1Q86UP6 607 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 TDRPQ86YL5 185 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 SCUBE1Q8IWY4 988 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 CYP4X1Q8N118 509 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 ACOT4Q8N9L9 421 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 FAM47BQ8NA70 645 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 ARMC2Q8NEN0 867 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 DNAJB14Q8TBM8 379 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 M1APQ8TC57 530 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 ZNF483Q8TF39 744 aaPredicted RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 C1QTNF3Q9BXJ4 246 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 PPCSQ9HAB8 311 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 SEMA4BQ9NPR2 832 aaPredicted RBP22.18■■□□□ 1.14
VARS-217ENST00000440048 PRTFDC1Q9NRG1 225 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 KCMF1Q9P0J7 381 aa22.18■■□□□ 1.14
VARS-217ENST00000440048 SMIM23A6NLE4 172 aa22.17■■□□□ 1.14
VARS-217ENST00000440048 CYR61O00622 381 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms