RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CSTF1Q05048 431 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 GAB1Q13480 694 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SERPINA13PQ6UXR4 307 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RFLNAQ6ZTI6 216 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 GATAD2BQ8WXI9 593 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 FOXJ1Q92949 421 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CIDECQ96AQ7 238 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 KCTD7Q96MP8 289 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RACGAP1Q9H0H5 632 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 OR51B5Q9H339 312 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 NMNAT1Q9HAN9 279 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 BEX1Q9HBH7 125 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 YARS2Q9Y2Z4 477 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 KLK4Q9Y5K2 254 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 DNAH12Q6ZR08 3092 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TRAV6A0A075B6T7 132 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 C2orf78A6NCI8 922 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PCP4L1A6NKN8 68 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 E7EQ34 232 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SLC30A4O14863 429 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GASTP01350 101 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 BCHEP06276 602 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CHMP24386 653 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SERPINA4P29622 427 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ERP29P30040 261 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 CCR7P32248 378 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 MRPL19P49406 292 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 RAB8AP61006 207 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RPS13P62277 151 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 KCNJ10P78508 379 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ARF5P84085 180 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GPR50Q13585 617 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 IRF3Q14653 427 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 HEPACAMQ14CZ8 416 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 CLEC12AQ5QGZ9 265 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 FAHD1Q6P587 224 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ZNF683Q8IZ20 524 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 LRRC17Q8N6Y2 441 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SYT14Q8NB59 555 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GEMIN6Q8WXD5 167 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 AP3S1Q92572 193 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 USP7Q93009 1102 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TESCQ96BS2 214 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PDLIM5Q96HC4 596 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 FOPNLQ96NB1 174 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TTLL2Q9BWV7 592 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 NLNQ9BYT8 704 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 P2RY12Q9H244 342 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PDFQ9HBH1 243 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 NKIRAS2Q9NYR9 191 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ZNF282Q9UDV7 671 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 MAN2B2Q9Y2E5 1009 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PCDHGB2Q9Y5G2 931 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RLFQ13129 1914 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CENPFP49454 3210 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 SLC38A8A6NNN8 435 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 SMAD6O43541 496 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 ORC5O43913 435 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 CH25HO95992 272 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 AKR1A1P14550 325 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 GPX2P18283 190 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 TALDO1P37837 337 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 OR3A3P47888 321 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 P2RX3P56373 397 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 COX10Q12887 443 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 DOC2AQ14183 400 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 OR2G6Q5TZ20 316 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 LRRC70Q7Z2Q7 622 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 ZNF557Q8N988 423 aaPredicted RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 OR6C4Q8NGE1 309 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 RNFT2Q96EX2 444 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MSANTD3Q96H12 275 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 NELL2Q99435 816 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 PITX2Q99697 317 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 PIP5K1AQ99755 562 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 P2RY13Q9BPV8 354 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 HTATIP2Q9BUP3 242 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MND1Q9BWT6 205 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MKRN2Q9H000 416 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 STUB1Q9UNE7 303 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 CLCA2Q9UQC9 943 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 RPL36Q9Y3U8 105 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 A3GALT2U3KPV4 340 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 TRBV5-3A0A0A0MS03 114 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MTMR11A4FU01 709 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 HNRNPCL2B2RXH8 293 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 PRRG1O14668 218 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 LRRTM2O43300 516 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 MPZL2O60487 215 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 NME6O75414 186 aaPredicted RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 SERPINI2O75830 405 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 CKMP06732 381 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 ENDOUP21128 410 aaKnown RBP8.68□□□□□ -1.02
COPB1-202ENST00000439561 OR1D2P34982 312 aa8.68□□□□□ -1.02
COPB1-202ENST00000439561 RECQLP46063 649 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms