RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, human

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATAD3A-206	ENST00000439513	GPR143	P51810	404 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	RAB38	P57729	211 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	GUCY2D	Q02846	1103 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	E2F2	Q14209	437 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PDK4	Q16654	411 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	XKR6	Q5GH73	641 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	RNFT1	Q5M7Z0	435 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	UBAP2	Q5T6F2	1119 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	GRTP1	Q5TC63	336 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SLC25A25	Q6KCM7	469 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ABHD17C	Q6PCB6	329 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	UBE3D	Q7Z6J8	389 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ISCA2	Q86U28	154 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CCDC25	Q86WR0	208 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PPM1N	Q8N819	430 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	OR2L5	Q8NG80	312 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	FBF1	Q8TES7	1133 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	EXT2	Q93063	718 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PTCD3	Q96EY7	689 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SEC16B	Q96JE7	1060 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	FAR2	Q96K12	515 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	GPR137	Q96N19	417 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	F2RL3	Q96RI0	385 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CAPS2	Q9BXY5	557 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	REXO4	Q9GZR2	422 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ALG9	Q9H6U8	611 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CNOT10	Q9H9A5	744 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PRTFDC1	Q9NRG1	225 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	IGSF5	Q9NSI5	407 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CD274	Q9NZQ7	290 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SH3BGRL2	Q9UJC5	107 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	RNF112	Q9ULX5	631 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PPIE	Q9UNP9	301 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	UTP11	Q9Y3A2	253 aa	Known RBP	13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CREBBP	Q92793	2442 aa		13.44	□□□□□ -0.26
ATAD3A-206	ENST00000439513	FBN2	P35556	2912 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TRBV11-1	A0A0K0K1C0	115 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ESYT3	A0FGR9	886 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ANKDD1B	A6NHY2	528 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	NPIPA5	E9PKD4	350 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CYR61	O00622	381 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CLGN	O14967	610 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ZNHIT1	O43257	154 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	B3GALT2	O43825	422 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PRKN	O60260	465 aa	Predicted RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	NME2P1	O60361	137 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CCNT2	O60583	730 aa	Known RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SLC19A2	O60779	497 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TFEB	P19484	476 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	NME2	P22392	152 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	GRN	P28799	593 aa	Known RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SPR	P35270	261 aa	Predicted RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	LIM2	P55344	173 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CHIT1	Q13231	466 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SLMAP	Q14BN4	828 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	C3AR1	Q16581	482 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ZNF793	Q6ZN11	406 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CHERP	Q8IWX8	916 aa	Known RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TMEM178A	Q8NBL3	297 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ARMC2	Q8NEN0	867 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	B3GNT7	Q8NFL0	401 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	THAP3	Q8WTV1	239 aa	Predicted RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ATOH8	Q96SQ7	321 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	DEFB126	Q9BYW3	111 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CD244	Q9BZW8	370 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PRDM7	Q9NQW5	492 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PNO1	Q9NRX1	252 aa	Known RBP	13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TINAG	Q9UJW2	476 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	DAPP1	Q9UN19	280 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	NPIPA1	Q9UND3	350 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ZNF835	Q9Y2P0	537 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	APC	P25054	2843 aa		13.43	□□□□□ -0.26
ATAD3A-206	ENST00000439513	MYOCOS	A0A1B0GUC4	107 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	HMX2	A2RU54	273 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TMEM200C	A6NKL6	621 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	UBXN8	O00124	270 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CCL21	O00585	134 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	KERA	O60938	352 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	PRF1	P14222	555 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CASP2	P42575	452 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CYB561	P49447	251 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	HLCS	P50747	726 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	HSD17B7	P56937	341 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ADORA2A-AS1	P86434	159 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	HSF1	Q00613	529 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	SLC7A5	Q01650	507 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ALDH6A1	Q02252	535 aa	Known RBP	13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	IRF8	Q02556	426 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CAV1	Q03135	178 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TERF2	Q15554	542 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TBCC	Q15814	346 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	MAPKAPK3	Q16644	382 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	TRIM40	Q6P9F5	258 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	LRRC70	Q7Z2Q7	622 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	CLNK	Q7Z7G1	428 aa		13.42	□□□□□ -0.26
ATAD3A-206	ENST00000439513	ZNF595	Q8IYB9	648 aa		13.42	□□□□□ -0.26

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