RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TEX26Q8N6G2 289 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 NAT8LQ8N9F0 302 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 RNF149Q8NC42 400 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 GIMAP1Q8WWP7 306 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 CDKN2AIPNLQ96HQ2 116 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 C16orf45Q96MC5 204 aaPredicted RBP3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 NEDD4LQ96PU5 975 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 PRMT1Q99873 361 aaKnown RBP3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 FUT8Q9BYC5 575 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF350Q9GZX5 532 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 TNMDQ9H2S6 317 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 C5orf66Q9H5L9 145 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 GPN1Q9HCN4 374 aaPredicted RBP3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 THEGQ9P2T0 379 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ASIC3Q9UHC3 531 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SH3BGRL2Q9UJC5 107 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 BLOC1S6Q9UL45 172 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 RRP15Q9Y3B9 282 aaKnown RBP3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZHX2Q9Y6X8 837 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 KIAA1217Q5T5P2 1943 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SYNJ2BP-COX16A0A087WUM0 186 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 TRAFD1O14545 582 aaPredicted RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 CTAGE5O15320 804 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 NOL3O60936 208 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ATP9AO75110 1047 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 CLN5O75503 358 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 DUS4LO95620 317 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC16A8O95907 504 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 DLATP10515 647 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 SKILP12757 684 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 GAP43P17677 238 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 C4BPBP20851 252 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 IL10P22301 178 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 IL4RP24394 825 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 FEN1P39748 380 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 PRPHP41219 470 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 KCNJ1P48048 391 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ARF5P84085 180 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ELAVL2Q12926 359 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 CBX3Q13185 183 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 TAF1BQ53T94 588 aaPredicted RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 C2CD6Q53TS8 623 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 HSP90AA5PQ58FG0 334 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 PM20D1Q6GTS8 502 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 C3P1Q6ZMU1 363 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF497Q6ZNH5 498 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 PIWIL3Q7Z3Z3 882 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ZFAND4Q86XD8 727 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF619Q8N2I2 560 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ELMOD1Q8N336 334 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 KIAA0895Q8NCT3 520 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 FIBINQ8TAL6 211 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 CABS1Q96KC9 395 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 FAM218AQ96MZ4 157 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 PCDHB18PQ96TA0 734 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 LGMNQ99538 433 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 RBM4BQ9BQ04 359 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 PAPOLGQ9BWT3 736 aaKnown RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 IL1RAPL2Q9NP60 686 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 HOXC10Q9NYD6 342 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 NLGN3Q9NZ94 848 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 RABL2AQ9UBK7 228 aaPredicted RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 DBF4Q9UBU7 674 aaPredicted RBP3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 ATP6V0A2Q9Y487 856 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 KIF3AQ9Y496 699 aa3.2□□□□□ -1.9
LSM1P1-201ENST00000438629 SPAG9O60271 1321 aaKnown RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 A4D1N5 150 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ANKDD1BA6NHY2 528 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ASB14A6NK59 587 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 E9PQ18 207 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 K7EQD1 137 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 MAGEB2O15479 319 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 TXNL1O43396 289 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 IDH3BO43837 385 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 SEC22BO75396 215 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 LETM1O95202 739 aaPredicted RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 GUCA1CO95843 209 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 EDNRAP25101 427 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 PKLRP30613 574 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 HSD17B7P56937 341 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 IL1RL1Q01638 556 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC3A1Q07837 685 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 DMTNQ08495 405 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 TEFQ10587 303 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 CALCOCO2Q13137 446 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF177Q13360 481 aaPredicted RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 MAPK11Q15759 364 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 FAM189A2Q15884 450 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 LRRC37A5PQ49AS3 106 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 GLRA4Q5JXX5 417 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 AGAP6Q5VW22 663 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF772Q68DY9 489 aaPredicted RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 UNC5DQ6UXZ4 953 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ADCK1Q86TW2 530 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 CATSPERDQ86XM0 798 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 KLHDC8AQ8IYD2 350 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF440Q8IYI8 595 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms