RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RAB8AP61006 207 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 REEP5Q00765 189 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 RCN2Q14257 317 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 RBM20Q5T481 1227 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 RNASEH2BQ5TBB1 312 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 HECTD2Q5U5R9 776 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 QSOX2Q6ZRP7 698 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 CYP4Z2PQ8N1L4 340 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 KIF2BQ8N4N8 673 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 AFAP1L2Q8N4X5 818 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 TMEM156Q8N614 296 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 TTLQ8NG68 377 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 OR56A3Q8NH54 315 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 NT5CQ8TCD5 201 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ADAMTS18Q8TE60 1221 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 CA5BP1Q8WTZ4 195 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 NEIL2Q969S2 332 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 SCMH1Q96GD3 660 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 LURAP1Q96LR2 239 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 OLFM1Q99784 485 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 CCDC77Q9BR77 488 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 SAP130Q9H0E3 1048 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 COPS7BQ9H9Q2 264 aaPredicted RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 PELI2Q9HAT8 420 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 FBXW2Q9UKT8 454 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ERVK-11Q9UQG0 969 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 CHMP2BQ9UQN3 213 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 MRPS33Q9Y291 106 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 MEMO1Q9Y316 297 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 VWA7Q9Y334 891 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 SETD2Q9BYW2 2564 aaPredicted RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 SYNDIG1LA6NDD5 238 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 NPEPPSL1A6NEC2 478 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 A8MUA0 341 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 E9PLN8 166 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 KLRC4-KLRK1H3BQV0 150 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 DNALI1O14645 258 aaPredicted RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 CDC40O60508 579 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS50-204ENST00000438395 BANF1O75531 89 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 NEURL1O76050 574 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 MYO1DO94832 1006 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 AHSGP02765 367 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 TUBB4AP04350 444 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 TPOP07202 933 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 HNMTP50135 292 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ITGA8P53708 1063 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ARL4CP56559 192 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 MLF1P58340 268 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ADORA2A-AS1P86434 159 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 CCZ1BP86790 482 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 CCZ1P86791 482 aaPredicted RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 TGM3Q08188 693 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ILF2Q12905 390 aaKnown RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 SLC13A2Q13183 592 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 MORF4L2Q15014 288 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 TERF2Q15554 542 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 TOR1AIP1Q5JTV8 583 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 COX20Q5RI15 118 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 CATSPEREQ5SY80 951 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 C3P1Q6ZMU1 363 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 Q6ZPB1 254 aaPredicted RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 SYDE1Q6ZW31 735 aaPredicted RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 GALNT7Q86SF2 657 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ADAMTSL2Q86TH1 951 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 THOC6Q86W42 341 aaKnown RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 CNTN4Q8IWV2 1026 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 KRT78Q8N1N4 520 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 AGGF1Q8N302 714 aaeCLIP7.26□□□□□ -1.25
VPS50-204ENST00000438395 NKAPQ8N5F7 415 aaKnown RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 OR4K1Q8NGD4 311 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ACTRT1Q8TDG2 376 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 SDCCAG3Q96C92 435 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 LRRC39Q96DD0 335 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 RUNDC3BQ96NL0 473 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 OSBPL9Q96SU4 736 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 VKORC1Q9BQB6 163 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 TRIM51Q9BSJ1 452 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 SARGQ9BW04 601 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 DDX47Q9H0S4 455 aaKnown RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 PNO1Q9NRX1 252 aaKnown RBP7.26□□□□□ -1.25
VPS50-204ENST00000438395 TXNDC16Q9P2K2 825 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 SLC17A6Q9P2U8 582 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 CTNNAL1Q9UBT7 734 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 ITGB1BP2Q9UKP3 347 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 MMACHCQ9Y4U1 282 aa7.26□□□□□ -1.25
VPS50-204ENST00000438395 HEATR5BQ9P2D3 2071 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 TCRBV16S1A1N1A0A5B0 115 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ACOT7O00154 380 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ERI3O43414 337 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 B3GALT2O43825 422 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 WDR47O94967 919 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 B3GALT4O96024 378 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 S100BP04271 92 aaPredicted RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 IFNA16P05015 189 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SERPINA6P08185 405 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 EPB42P16452 691 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ZNF37AP17032 561 aaPredicted RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 TCP1P17987 556 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms