RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 COL6A3P12111 3177 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 LRIT2A6NDA9 550 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 C10orf142B7Z368 130 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 H0Y8X5 98 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ATP6V1B1P15313 513 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 CMPK1P30085 196 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ZP2Q05996 745 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 OR2T5Q6IEZ7 315 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 SPESP1Q6UW49 350 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ANGPTL8Q6UXH0 198 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 OR2T29Q8NH02 315 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 OR5P2Q8WZ92 322 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 YTHDF1Q9BYJ9 559 aaKnown RBP24.49■■□□□ 1.51
CPNE1-216ENST00000437340 SLC6A20Q9NP91 592 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 C1GALT1Q9NS00 363 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 CA14Q9ULX7 337 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 CA5BQ9Y2D0 317 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 NOBOXO60393 691 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 DPM1O60762 260 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 PEBP1P30086 187 aaKnown RBP24.48■■□□□ 1.51
CPNE1-216ENST00000437340 CHI3L1P36222 383 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-216ENST00000437340 TTC23Q5W5X9 447 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 SHQ1Q6PI26 577 aaKnown RBP24.48■■□□□ 1.51
CPNE1-216ENST00000437340 SATL1Q86VE3 508 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 OR10Q1Q8NGQ4 319 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 YIPF3Q9GZM5 350 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 TUBA8Q9NY65 449 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-216ENST00000437340 USP36Q9P275 1121 aaKnown RBP24.48■■□□□ 1.51
CPNE1-216ENST00000437340 RAPGEFL1Q9UHV5 662 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 BAG5Q9UL15 447 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 TRIOO75962 3097 aa24.48■■□□□ 1.51
CPNE1-216ENST00000437340 HEATR5BQ9P2D3 2071 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TRIM64A6NGJ6 449 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SCAMP1O15126 338 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 ETFAP13804 333 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 NELFEP18615 380 aaKnown RBP24.47■■□□□ 1.51
CPNE1-216ENST00000437340 BCL6P41182 706 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 FRKP42685 505 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-216ENST00000437340 RFX4Q33E94 735 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 ADPRMQ3LIE5 342 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 COX20Q5RI15 118 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TPRG1LQ5T0D9 272 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 AMIGO1Q86WK6 493 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 PLD3Q8IV08 490 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 MMP21Q8N119 569 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 LCN9Q8WX39 176 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 NEUROD4Q9HD90 331 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TRNAU1APQ9NX07 287 aaKnown RBP24.47■■□□□ 1.51
CPNE1-216ENST00000437340 A0A0A6YYD5 115 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 PRAMEF33A0A0G2JMD5 474 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 PDPK1O15530 556 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SUV39H1O43463 412 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TMPRSS11DO60235 418 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 FKBP9O95302 570 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 RXRGP48443 463 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 LRRC32Q14392 662 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SLC5A12Q1EHB4 618 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 CCDC80Q76M96 950 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TMEM179BQ7Z7N9 219 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 ZNF786Q8N393 782 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 MAL2Q969L2 176 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TSACCQ96A04 125 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-216ENST00000437340 NLNQ9BYT8 704 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 GABARAPL1Q9H0R8 117 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 EPS8L2Q9H6S3 715 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SPHK1Q9NYA1 384 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 TAS2R7Q9NYW3 318 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SNX7Q9UNH6 387 aa24.47■■□□□ 1.51
CPNE1-216ENST00000437340 SEMA4FO95754 770 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 IGLV3-19P01714 112 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 DRD2P14416 443 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 AK4P27144 223 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-216ENST00000437340 PRIM2P49643 509 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 ARHGDIAP52565 204 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 CRYBA2P53672 197 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 ZNF630Q2M218 657 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-216ENST00000437340 RD3Q7Z3Z2 195 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 VTCN1Q7Z7D3 282 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 GALNT10Q86SR1 603 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 RNF130Q86XS8 419 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 SLC30A8Q8IWU4 369 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 FBXL6Q8N531 539 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 METTL25Q8N6Q8 603 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 TMEM145Q8NBT3 493 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 NRBF2Q96F24 287 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 DPH7Q9BTV6 452 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 SMURF2Q9HAU4 748 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 KLF15Q9UIH9 416 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 C3orf18Q9UK00 162 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 ABCG2Q9UNQ0 655 aa24.46■■□□□ 1.51
CPNE1-216ENST00000437340 A0A1B0GTW7 788 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 EME2A4GXA9 379 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 MAN2B1O00754 1011 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 HAT1O14929 419 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 CLIC3O95833 236 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 EML2O95834 649 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 SERPIND1P05546 499 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 CHRM5P08912 532 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 SOAT1P35610 550 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ACTR1BP42025 376 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms