RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GPR153Q6NV75 609 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 NIPAL1Q6NVV3 410 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 ZNF852Q6ZMS4 543 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 AHSA2Q719I0 299 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 IGFN1Q86VF2 1251 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 AMZ2Q86W34 360 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 C12orf40Q86WS4 652 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 RNF130Q86XS8 419 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 PLD3Q8IV08 490 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 CCDC71Q8IV32 467 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 SLC5A8Q8N695 610 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 C9orf43Q8TAL5 461 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 DYNC2LI1Q8TCX1 351 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 APH1BQ8WW43 257 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 NXPE3Q969Y0 559 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 CIDECQ96AQ7 238 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 ZNF707Q96C28 371 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 ZNF764Q96H86 408 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 CRELD1Q96HD1 420 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 SAMD11Q96NU1 681 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 KCNC2Q96PR1 638 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 MYOCQ99972 504 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 HDAC8Q9BY41 377 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 AKIP1Q9NQ31 210 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 WASH6PQ9NQA3 447 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 DNAAF2Q9NVR5 837 aaKnown RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 GPATCH2Q9NW75 528 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 FKBP14Q9NWM8 211 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 HCN4Q9Y3Q4 1203 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 MAP4K5Q9Y4K4 846 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 HCFC2Q9Y5Z7 792 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 CLCA1A8K7I4 914 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 C5orf58C9J3I9 102 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 PRRT4C9JH25 899 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 K7ESM1 405 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 SAP18O00422 153 aaKnown RBP9.96□□□□□ -0.82
CD44-210ENST00000434472 TLL1O43897 1013 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 GADD45GO95257 159 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 OPN1SWP03999 348 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 IFNW1P05000 195 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 CDK1P06493 297 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 ERGP11308 486 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 CD36P16671 472 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 DDCP20711 480 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 NR4A1P22736 598 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 TPP2P29144 1249 aaPredicted RBP9.96□□□□□ -0.82
CD44-210ENST00000434472 EPHA2P29317 976 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 MLLT10P55197 1068 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 CDC42P60953 191 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 KCNC4Q03721 635 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 CNTN1Q12860 1018 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 NFE2L1Q14494 772 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 HEPACAMQ14CZ8 416 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
CD44-210ENST00000434472 SLC5A12Q1EHB4 618 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 MPEG1Q2M385 716 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 FAM46CQ5VWP2 391 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 KHDRBS2Q5VWX1 349 aaKnown RBP9.96□□□□□ -0.82
CD44-210ENST00000434472 LRRTM4Q86VH4 590 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 ZNF547Q8IVP9 402 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 DNAJC22Q8N4W6 341 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 RAB42Q8N4Z0 105 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 OR6Q1Q8NGQ2 317 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 PHOSPHO2Q8TCD6 241 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 SUSD6Q92537 303 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 DNASE1L2Q92874 299 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 LGALS12Q96DT0 336 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 COX14Q96I36 57 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 COL21A1Q96P44 957 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 FAM129BQ96TA1 746 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 SPNS1Q9H2V7 528 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 A4GALTQ9NPC4 353 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 GIN1Q9NXP7 522 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 DUSP12Q9UNI6 340 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 PCNTO95613 3336 aa9.96□□□□□ -0.82
CD44-210ENST00000434472 SH3D21A4FU49 640 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 PLK4O00444 970 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 CAPN5O15484 640 aaPredicted RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 PDPK1O15530 556 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 VIPP01282 170 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 GBAP04062 536 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 ALOX5P09917 674 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 FSHRP23945 695 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TGFBR2P37173 567 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 LIMS1P48059 325 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SLC6A11P48066 632 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 CCR8P51685 355 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 MAPK12P53778 367 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 VBP1P61758 197 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TRA2BP62995 288 aaKnown RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 REEP5Q00765 189 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 MEF2AQ02078 507 aaPredicted RBP9.95□□□□□ -0.82
CD44-210ENST00000434472 ZNF234Q14588 700 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 PDGFRLQ15198 375 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TBC1D25Q3MII6 688 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 TOR1AIP1Q5JTV8 583 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 IER5LQ5T953 404 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
CD44-210ENST00000434472 VN1R5Q7Z5H4 357 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms