RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 MAGEL2Q9UJ55 1249 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 INMTO95050 263 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 GBAP04062 536 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 BMP7P18075 431 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 SMU1Q2TAY7 513 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 DEFB110Q30KQ9 67 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 CHERPQ8IWX8 916 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PJA1Q8NG27 643 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RIT1Q92963 219 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PTCHD1Q96NR3 888 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ACTL8Q9H568 366 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 FADS2O95864 444 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RNH1P13489 461 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PTCHD4Q6ZW05 846 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 SDR16C5Q8N3Y7 309 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF483Q8TF39 744 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 NSUN5Q96P11 429 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 SLC38A2Q96QD8 506 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 NMUR2Q9GZQ4 415 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RDH14Q9HBH5 336 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM27Q9HBJ8 222 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 SAMHD1Q9Y3Z3 626 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ECHS1P30084 290 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 C18orf21Q32NC0 220 aaPredicted RBP12.4□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF534Q76KX8 674 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 SYVN1Q86TM6 617 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 STX12Q86Y82 276 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 MKS1Q9NXB0 559 aa12.4□□□□□ -0.43
PTCH1-207ENST00000429896 TNFAIP8O95379 198 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 C8orf89P0DMQ9 161 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ZXDAP98168 799 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 DPTQ07507 201 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 PUDPQ08623 228 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 UNC50Q53HI1 259 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 MTX3Q5HYI7 312 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 MZT2AQ6P582 158 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 FAM110BQ8TC76 370 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ZCCHC3Q9NUD5 404 aaKnown RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 BTBD3Q9Y2F9 522 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 KLF11O14901 512 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 REM1O75628 298 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 C9P02748 559 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 LHCGRP22888 699 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 PAX7P23759 505 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 PRDX6P30041 224 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 PLGLB1Q02325 96 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 NR1D2Q14995 579 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 BCL7AQ4VC05 210 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 MCEMP1Q8IX19 187 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 TRIM63Q969Q1 353 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 THUMPD1Q9NXG2 353 aaKnown RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 SLC9B1P1A6NJY1 282 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ARHGEF33A8MVX0 844 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 H3BSH0 61 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 AGR2O95994 175 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 TUBB3Q13509 450 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 GPR107Q5VW38 600 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 DENND5AQ6IQ26 1287 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF433Q8N7K0 673 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 NAXEQ8NCW5 288 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 OR4K14Q8NGD5 310 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 OR5K2Q8NHB8 316 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 RACGAP1Q9H0H5 632 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 TM9SF3Q9HD45 589 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 IKZF2Q9UKS7 526 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 SCN10AQ9Y5Y9 1956 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 H0Y8X5 98 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 KPNA4O00629 521 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 MOSPD3O75425 235 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 CDC123O75794 336 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 C1orf105O95561 183 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 MT-ND1P03886 318 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 OR4C11Q6IEV9 310 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ISCA2Q86U28 154 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 C11orf65Q8NCR3 313 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 PDXPQ96GD0 296 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 TRAPPC9Q96Q05 1148 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 LYSMD1Q96S90 227 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 TTYH1Q9H313 450 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ALG2Q9H553 416 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 ARL8BQ9NVJ2 186 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 SLC39A1Q9NY26 324 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 A6NCN8 305 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 CARTPTQ16568 116 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms