RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CLCA3PQ9Y6N3 262 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CTDSP2O14595 271 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CHST10O43529 356 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 LEFTY1O75610 366 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 OR5F1O95221 314 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PTTG1O95997 202 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PEX11BO96011 259 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PRLP01236 227 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 SRPRAP08240 638 aaKnown RBP12.13□□□□□ -0.47
CPNE4-201ENST00000429747 LAG3P18627 525 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ATF6P18850 670 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PPM1AP35813 382 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CAP1Q01518 475 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 RBBP4Q09028 425 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ATAT1Q5SQI0 421 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MFSD4BQ5TF39 518 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 IQCHQ86VS3 1027 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ASCC1Q8N9N2 400 aaKnown RBP12.13□□□□□ -0.47
CPNE4-201ENST00000429747 GRPEL2Q8TAA5 225 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 SORCS1Q8WY21 1168 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 DNASE1L2Q92874 299 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 RFKQ969G6 155 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ZFP3Q96NJ6 502 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MBOAT4Q96T53 435 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CCDC3Q9BQI4 270 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 SLC25A37Q9NYZ2 338 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
CPNE4-201ENST00000429747 TRBV23OR9-2A0A075B6M9 112 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 ASPDHA6ND91 283 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PRNPP04156 253 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 GGT2P36268 569 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 PIK3CBP42338 1070 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 TBPL1P62380 186 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 SELENOWP63302 87 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MC1RQ01726 317 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-201ENST00000429747 AQP6Q13520 282 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 RFLNAQ6ZTI6 216 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CBLL1Q75N03 491 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CADM3Q8N126 398 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 CHST14Q8NCH0 376 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 OR10H4Q8NGA5 316 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 IGSF21Q96ID5 467 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 NTN4Q9HB63 628 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 TBC1D14Q9P2M4 693 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 P2RX2Q9UBL9 471 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 MYO7AQ13402 2215 aa12.13□□□□□ -0.47
CPNE4-201ENST00000429747 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 GABRR3A8MPY1 467 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 INHAP05111 366 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 RB1P06400 928 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 CYBAP13498 195 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 HPGDP15428 266 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF30P17039 623 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 GSTM4Q03013 218 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 VEZF1Q14119 521 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 UBE2UQ5VVX9 321 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 COMMD6Q7Z4G1 85 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 AMZ2Q86W34 360 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 OOSP2Q86WS3 158 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 DENND6BQ8NEG7 585 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 B3GNT7Q8NFL0 401 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 DKK3Q9UBP4 350 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 IFT52Q9Y366 437 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 NOTOA8MTQ0 251 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 SLC16A6O15403 523 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 KELP23276 732 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 FADDQ13158 208 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 COL9A2Q14055 689 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 NUDT13Q86X67 352 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 WACQ9BTA9 647 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 MCUBQ9NWR8 336 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 ANKMY1Q9P2S6 941 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 DEC1Q9P2X7 70 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 WNT6Q9Y6F9 365 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 LEFTY2O00292 366 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TYRP14679 529 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 C4BPBP20851 252 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TLX1P31314 330 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TGFBR1P36897 503 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 SOX3P41225 446 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 CCR4P51679 360 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 SMSP52788 366 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 LY6G5CQ5SRR4 150 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms