RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MAPK12P53778 367 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 CLNS1AP54105 237 aaKnown RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 ATXN3P54252 364 aaPredicted RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 CLDN6P56747 220 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 C21orf58P58505 322 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PSME3P61289 254 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 STXBP1P61764 594 aaKnown RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 RELAQ04206 551 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 DUSP2Q05923 314 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 KLC1Q07866 573 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 STX5Q13190 355 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PWP1Q13610 501 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 RUNX2Q13950 521 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 NFYCQ13952 458 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 CEACAM7Q14002 265 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PRTGQ2VWP7 1150 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 TRMT5Q32P41 509 aaKnown RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 DEFB134Q4QY38 66 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 TMEM35AQ53FP2 167 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 TRIM40Q6P9F5 258 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 DLEU7Q6UYE1 221 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PRSS42Q7Z5A4 293 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 DHDDSQ86SQ9 333 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 KIAA2013Q8IYS2 634 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PGAM4Q8N0Y7 254 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 TMEM132CQ8N3T6 1108 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 METTL27Q8N6F8 245 aaPredicted RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 RNF148Q8N7C7 305 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ACOT4Q8N9L9 421 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 CAMKVQ8NCB2 501 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 GLB1L3Q8NCI6 653 aaPredicted RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 OR5T3Q8NGG3 340 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 GTF2H4Q92759 462 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ZDHHC12Q96GR4 267 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ZNF285Q96NJ3 590 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 KCNC2Q96PR1 638 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 OR52E6Q96RD3 313 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 CSF3RQ99062 836 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 CD180Q99467 661 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ZBTB18Q99592 522 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 GPATCH1Q9BRR8 931 aaKnown RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 TBCDQ9BTW9 1192 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 THTPAQ9BU02 230 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 EDEM2Q9BV94 578 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 PAIP1Q9H074 479 aaKnown RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 C1orf21Q9H246 121 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 IKZF5Q9H5V7 419 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 REEP4Q9H6H4 257 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 EFCAB1Q9HAE3 211 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 SLAMF7Q9NQ25 335 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC6-204ENST00000428868 CMTM6Q9NX76 183 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 SLC25A37Q9NYZ2 338 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 AHSPQ9NZD4 102 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 SEMA5BQ9P283 1151 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ATP6V1HQ9UI12 483 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 LEF1Q9UJU2 399 aaPredicted RBP8.42□□□□□ -1.06
SMC6-204ENST00000428868 USP22Q9UPT9 525 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 ATG4BQ9Y4P1 393 aa8.42□□□□□ -1.06
SMC6-204ENST00000428868 EXPH5Q8NEV8 1989 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TRBV5-3A0A0A0MS03 114 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 IGHV5-10-1A0A0J9YXX1 117 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 GLOD5A6NK44 160 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM150CB9EJG8 249 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PROB1E7EW31 1015 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SGK494L7N484 410 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 NME4O00746 187 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 MAP3K7O43318 606 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 FOXS1O43638 330 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 GDF9O60383 454 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PRMT3O60678 531 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 RDH16O75452 317 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SCELO95171 688 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ZBTB11O95625 1053 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 FAM58BPP0C7Q3 252 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ATXN8OSP0DMR3 200 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ALOX12P18054 663 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TGM1P22735 817 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SLC6A2P23975 617 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 S100A3P33764 101 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PGM1P36871 562 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 HPCAL1P37235 193 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ASMTP46597 345 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ALDH9A1P49189 494 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SLC7A2P52569 658 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 HNRNPFP52597 415 aaKnown RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 PDX1P52945 283 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SLAMF1Q13291 335 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SLC14A1Q13336 389 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ART3Q13508 389 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ZNF750Q32MQ0 723 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 DNAL1Q4LDG9 190 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 RABL3Q5HYI8 236 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms