RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CSF2RAP15509 400 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FMO3P31513 532 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 GGT2P36268 569 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 E2F1Q01094 437 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 DLX2Q07687 328 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 GNMTQ14749 295 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SIRPB2Q5JXA9 342 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 OR4F3Q6IEY1 312 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 PAQR3Q6TCH7 311 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 TRAPPC6BQ86SZ2 158 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 HORMAD2Q8N7B1 307 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 NSMAFQ92636 917 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 GCDHQ92947 438 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 WDR92Q96MX6 357 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 PLAGL1Q9UM63 463 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 CLDN7O95471 211 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SOD2P04179 222 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 HLA-DPB1P04440 258 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 HBQ1P09105 142 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SPARCP09486 303 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 CD3GP09693 182 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 IFI30P13284 250 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 DEFA5Q01523 94 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 BLMHQ13867 455 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF630Q2M218 657 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SHQ1Q6PI26 577 aaKnown RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 KCTD18Q6PI47 426 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 POC1BQ8TC44 478 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FANK1Q8TC84 345 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 GNPDA2Q8TDQ7 276 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 OSTF1Q92882 214 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SLC2A11Q9BYW1 496 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 PIGVQ9NUD9 493 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RARRES3Q9UL19 164 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SH2B3Q9UQQ2 575 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FXYD6-FXYD2A0A087WZ82 144 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 HCRTR2O43614 444 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 KDELR3O43731 214 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 IFNA5P01569 189 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FAM163BP0C2L3 166 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 THBS2P35442 1172 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 CHRNA4P43681 627 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM198Q66K66 360 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SLC36A4Q6YBV0 504 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RNF111Q6ZNA4 994 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 TMED4Q7Z7H5 227 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SERINC5Q86VE9 423 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 CMTM8Q8IZV2 173 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 GPR137CQ8N3F9 429 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 IL17RCQ8NAC3 791 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 SPRYD4Q8WW59 207 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 FXYD6Q9H0Q3 95 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ICKQ9UPZ9 632 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 APBB3O95704 486 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 IFNA7P01567 189 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ERN2Q76MJ5 926 aaKnown RBP8.63□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM110Q86TL2 294 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 OR6N2Q8NGY6 317 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RAB2BQ8WUD1 216 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RAD9AQ99638 391 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ETAA1Q9NY74 926 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 DKK3Q9UBP4 350 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF175Q9Y473 711 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 WDR45Q9Y484 360 aa8.63□□□□□ -1.03
CTNND1-208ENST00000428599 MTMR11A4FU01 709 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MYADML2A6NDP7 307 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 SNAPC5O75971 98 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 UGT2B10P36537 528 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CDH11P55287 796 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GPR17Q13304 367 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GBX1Q14549 363 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CARD17Q5XLA6 110 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 RABEPKQ7Z6M1 372 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 FOXJ1Q92949 421 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ZIM2Q9NZV7 527 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 DNAJB4Q9UDY4 337 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 NUFIP1Q9UHK0 495 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 C2orf92A0A1B0GVN3 265 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 PCP4L1A6NKN8 68 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MANBAO00462 879 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MAP2K7O14733 419 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 SCO2O43819 266 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF865P0CJ78 1059 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 F8A1P23610 371 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 UQCRC1P31930 480 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 KCNQ1P51787 676 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HADHBP55084 474 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 SLC26A5P58743 744 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 RPL26P61254 145 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HMGCS1Q01581 520 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 PLEKHG6Q3KR16 790 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms