RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 NADKO95544 446 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PCNAP12004 261 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PBLDP30039 288 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 HOXD11P31277 338 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 ARL1P40616 181 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 LSM3P62310 102 aaKnown RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 RPL38P63173 70 aaKnown RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 MLLT1Q03111 559 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PRDX1Q06830 199 aaKnown RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 FZD5Q13467 585 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 DAG1Q14118 895 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 KIR2DS5Q14953 304 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 MFSD4BQ5TF39 518 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PAGE2Q7Z2X7 111 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 C11orf74Q86VG3 221 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PGBD3Q8N328 593 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 SLC13A3Q8WWT9 602 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 NEIL2Q969S2 332 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 VPS33AQ96AX1 596 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 COQ8BQ96D53 544 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 VMP1Q96GC9 406 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 CDX2Q99626 313 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-204ENST00000427414 GSDMCQ9BYG8 508 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 ATG10Q9H0Y0 220 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 MYNNQ9NPC7 610 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 DMRT3Q9NQL9 472 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 POT1Q9NUX5 634 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 IFT52Q9Y366 437 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 PCDHGA8Q9Y5G5 932 aa8.17□□□□□ -1.1
SH3D19-204ENST00000427414 A0A1W2PPC4 97 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PIPSLA2A3N6 862 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MAN1A2O60476 641 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 NDUFS2O75306 463 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 INMTO95050 263 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 RASGRP1O95267 797 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 CD22P20273 847 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ITPKAP23677 461 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 NKX2-5P52952 324 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 SRP54P61011 504 aaKnown RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 UFM1P61960 85 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PPP2CBP62714 309 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PPP2CAP67775 309 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ACSM2AQ08AH3 577 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 KIR2DS3Q14952 304 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 RPE65Q16518 533 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 CTF1Q16619 201 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 CLPPQ16740 277 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MANEAQ5SRI9 462 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 C6orf141Q5SZD1 244 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PRPF38BQ5VTL8 546 aaKnown RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ACSM2BQ68CK6 577 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ADCK1Q86TW2 530 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 LIX1Q8N485 282 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 LILRA3Q8N6C8 439 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 Q8N9G6 341 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 SRFBP1Q8NEF9 429 aaKnown RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 GOT1L1Q8NHS2 421 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 HDAC2Q92769 488 aaKnown RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TMBIM1Q969X1 311 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TOR3AQ9H497 397 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 LMAN1LQ9HAT1 526 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 SNX7Q9UNH6 387 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 USP22Q9UPT9 525 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 OR1A2Q9Y585 309 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TRBV5-3A0A0A0MS03 114 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 A0A1W2PPV9 198 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TNFSF14O43557 240 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ALPLP05186 524 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 IGHV4-34P06331 123 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PGRP06401 933 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 HTR1AP08908 422 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 IFI6P09912 130 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 BMP4P12644 408 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 HOXB9P17482 250 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 IL12AP29459 219 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 ALDH4A1P30038 563 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TIA1P31483 386 aaKnown RBP eCLIP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PDE7AQ13946 482 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 DGUOKQ16854 277 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TTC23Q5W5X9 447 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TMIGD1Q6UXZ0 262 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 DLEU7Q6UYE1 221 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 LMNTD1Q8N9Z9 388 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 VPS37AQ8NEZ2 397 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TSTD1Q8NFU3 115 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MUL1Q969V5 352 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MED8Q96G25 268 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 FERD3LQ96RJ6 166 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 NTN4Q9HB63 628 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MAGEL2Q9UJ55 1249 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 POLR3HQ9Y535 204 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-204ENST00000427414 TRANK1O15050 2925 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 MYO7AQ13402 2215 aa8.16□□□□□ -1.1
SH3D19-204ENST00000427414 NARSO43776 548 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms