RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ALDH9A1P49189 494 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DEFB110Q30KQ9 67 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 NANOGP8Q6NSW7 305 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 GUSBP11Q6P575 273 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 CYB5D1Q6P9G0 228 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SLC15A3Q8IY34 581 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DNAJC22Q8N4W6 341 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 NATD1Q8N6N6 113 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 ZCCHC10Q8TBK6 192 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 GBP5Q96PP8 586 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SH3GL1Q99961 368 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 NANOGQ9H9S0 305 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 PCDHGB4Q9UN71 923 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 MAN2B2Q9Y2E5 1009 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DMDP11532 3685 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 A0A096LPI6 279 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 A8MUI8 341 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 C4orf51C9J302 202 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 RNASET2O00584 256 aaKnown RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 CPSF4O95639 269 aaKnown RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 ALOX12P18054 663 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 TCN1P20061 433 aaPredicted RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 CERS1P27544 350 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 TRPC1P48995 793 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DUSP3P51452 185 aaPredicted RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 WNT3P56703 355 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DAB2P98082 770 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 PDE7AQ13946 482 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 CEACAM7Q14002 265 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DEFB134Q4QY38 66 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SNAP47Q5SQN1 464 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 NDUFAF5Q5TEU4 345 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 TICAM1Q8IUC6 712 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 C10orf67Q8IYJ2 551 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SERINC2Q96SA4 455 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 CHRNA10Q9GZZ6 450 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 IRAK4Q9NWZ3 460 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 LYARQ9NX58 379 aaKnown RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 ABCD2Q9UBJ2 740 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 PLCL2Q9UPR0 1127 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 VPS13AQ96RL7 3174 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 KMT2EQ8IZD2 1858 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 NVLO15381 856 aaKnown RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 B3GALT2O43825 422 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 SCN2BO60939 215 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 SORBS2O94875 1100 aaKnown RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 C9P02748 559 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 SMIM10L1P0DMW3 83 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 HSD11B2P80365 405 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 LRIF1Q5T3J3 769 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 LAIR1Q6GTX8 287 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 MRM1Q6IN84 353 aaKnown RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 TCEAL6Q6IPX3 200 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 TMEM214Q6NUQ4 689 aaKnown RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 ZNF621Q6ZSS3 439 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 DGLUCYQ7Z3D6 616 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 TCEAL3Q969E4 200 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 MIEF2Q96C03 454 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 SMIM10Q96HG1 83 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 ANKRD27Q96NW4 1050 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 INPP5KQ9BT40 448 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 PAIP1Q9H074 479 aaKnown RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 SERHLQ9NQF3 203 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 STARD5Q9NSY2 213 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 TEX10Q9NXF1 929 aaPredicted RBP14.34□□□□□ -0.11
GINS3-203ENST00000426538 VAPAQ9P0L0 249 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 BCAP29Q9UHQ4 241 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 BTNL2Q9UIR0 455 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 POMPQ9Y244 141 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 PCDHB14Q9Y5E9 798 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 PCDHA9Q9Y5H5 950 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 SLC22A7Q9Y694 548 aa14.34□□□□□ -0.11
GINS3-203ENST00000426538 LY6G6EA0A0G2JKS1 128 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 C1orf226A1L170 272 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 HCRTR1O43613 425 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 MGRN1O60291 552 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 TBX19O60806 448 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 SCELO95171 688 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 B3GALT4O96024 378 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 GSNP06396 782 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 ZNF883P0CG24 379 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 SEPHS1P49903 392 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 CFHR1Q03591 330 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 KPNB1Q14974 876 aaKnown RBP14.33□□□□□ -0.12
GINS3-203ENST00000426538 NDUFA9Q16795 377 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 SPATS1Q496A3 300 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 ZNF385BQ569K4 471 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 RABL3Q5HYI8 236 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 TCTE1Q5JU00 501 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 PLA2G2CQ5R387 149 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 TMEM71Q6P5X7 295 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 MMP21Q8N119 569 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 OR8J3Q8NGG0 315 aa14.33□□□□□ -0.12
GINS3-203ENST00000426538 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms