RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 LRRC70Q7Z2Q7 622 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 TSLPQ969D9 159 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 GAL3ST3Q96A11 431 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 TRIM44Q96DX7 344 aaPredicted RBP11.95□□□□□ -0.5
SGCE-203ENST00000425444 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 FAR2Q96K12 515 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 LMF1Q96S06 567 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 FMO2Q99518 471 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.5
SGCE-203ENST00000425444 TSPYL1Q9H0U9 437 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 KLHL31Q9H511 634 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 MCCC2Q9HCC0 563 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 TEKT2Q9UIF3 430 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 ACOT9Q9Y305 439 aa11.95□□□□□ -0.5
SGCE-203ENST00000425444 A0A087X1B8 175 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 A0A088AWK7 358 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 A0A0G2JN53 185 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 SYCE1LA8MT33 242 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 A8MUI8 341 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 MAGEB17A8MXT2 336 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 UBXN8O00124 270 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 ERI3O43414 337 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 KERAO60938 352 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 ACSL3O95573 720 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 F10P00742 488 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 INHBAP08476 426 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 RNH1P13489 461 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 ZNF10P21506 573 aaPredicted RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 HPDP32754 393 aaPredicted RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 SERPINB8P50452 374 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 OR4D2P58180 307 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 IRF9Q00978 393 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 IRF8Q02556 426 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 HYAL2Q12891 473 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 DLG1Q12959 904 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 EXT1Q16394 746 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 HIST2H2ACQ16777 129 aaPredicted RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 FAM83EQ2M2I3 478 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PAGE2BQ5JRK9 111 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PLAG1Q6DJT9 500 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 HIST2H2AA3Q6FI13 130 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 KLC3Q6P597 504 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 CCDC91Q7Z6B0 441 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 BCORP1Q8N888 145 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PLPP5Q8NEB5 264 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 CATSPER1Q8NEC5 780 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 SUN3Q8TAQ9 357 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 CREB3L4Q8TEY5 395 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 KCTD4Q8WVF5 259 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PSMF1Q92530 271 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 NXNL1Q96CM4 212 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PTCD3Q96EY7 689 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 LPAR4Q99677 370 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 EFCAB11Q9BUY7 163 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 CD244Q9BZW8 370 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PITHD1Q9GZP4 211 aaPredicted RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 CDC42EP4Q9H3Q1 356 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 EHD1Q9H4M9 534 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 COPS7BQ9H9Q2 264 aaPredicted RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 SNX15Q9NRS6 342 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 LANCL2Q9NS86 450 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 PLA2G3Q9NZ20 509 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 OPTCQ9UBM4 332 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 DMGDHQ9UI17 866 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 PTBP2Q9UKA9 531 aaKnown RBP11.94□□□□□ -0.5
SGCE-203ENST00000425444 IKBKGQ9Y6K9 419 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 SCN3AQ9NY46 2000 aa11.94□□□□□ -0.5
SGCE-203ENST00000425444 TRAV17A0A0B4J275 112 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 C4orf51C9J302 202 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 C19orf84I3L1E1 186 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 PRMT3O60678 531 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 DNAJB6O75190 326 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 CLEC3AO75596 197 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 C2P06681 752 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 GFAPP14136 432 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 TYK2P29597 1187 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 HNRNPH1P31943 449 aaKnown RBP11.93□□□□□ -0.5
SGCE-203ENST00000425444 BTN3A2P78410 334 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 LAPTM5Q13571 262 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 DOC2AQ14183 400 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 GLE1Q53GS7 698 aaKnown RBP11.93□□□□□ -0.5
SGCE-203ENST00000425444 TRIM40Q6P9F5 258 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 XKRXQ6PP77 449 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 QSOX2Q6ZRP7 698 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 TAOK1Q7L7X3 1001 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 ISCA2Q86U28 154 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 CYP4X1Q8N118 509 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 CA13Q8N1Q1 262 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 ARMC2Q8NEN0 867 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 SEC16BQ96JE7 1060 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 PTCHD1Q96NR3 888 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 ATOH8Q96SQ7 321 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms