RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CTAGE5O15320 804 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 RHBDL1O75783 438 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 CD1EP15812 388 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 PAX7P23759 505 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 TNNT3P45378 269 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 LIMK1P53667 647 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 HMGCS2P54868 508 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 NCBP1Q09161 790 aaKnown RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 TRDNQ13061 729 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 WTAPQ15007 396 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 LACTB2Q53H82 288 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 FUT10Q6P4F1 479 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 TIFABQ6ZNK6 161 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 Q71RC1 249 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 CENPQQ7L2Z9 268 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 SLC4A11Q8NBS3 891 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 KIF18AQ8NI77 898 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 SEPT1Q8WYJ6 367 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 RBM41Q96IZ5 413 aaKnown RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 MCCC1Q96RQ3 725 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 TREX2Q9BQ50 279 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 CHCHD6Q9BRQ6 235 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 FNDC4Q9H6D8 234 aaPredicted RBP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 LCMT1Q9UIC8 334 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 ITGA11Q9UKX5 1188 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 SMC3Q9UQE7 1217 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 NIP7Q9Y221 180 aaKnown RBP eCLIP3.01□□□□□ -1.93
LINC01040-201ENST00000425048 UHRF1BP1LA0JNW5 1464 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 SETD5Q9C0A6 1442 aa3.01□□□□□ -1.93
LINC01040-201ENST00000425048 CCDC7Q96M83 1385 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 PLEKHG2Q9H7P9 1386 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 BCORL1Q5H9F3 1711 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 EDDM13A0A1B0GTR0 161 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 A0A1B0GUL7 405 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 E2F3O00716 465 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 KIF5CO60282 957 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 APBB3O95704 486 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 DNTTP04053 509 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 ACHEP22303 614 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 EIF2DP41214 584 aaKnown RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 CD151P48509 253 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 LIG4P49917 911 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 CKAP4Q07065 602 aaKnown RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 GRB14Q14449 540 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 CCL14Q16627 93 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 ZSCAN26Q16670 478 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 ISXQ2M1V0 245 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 SYT10Q6XYQ8 523 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 ANKRD33Q7Z3H0 272 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 TRMT11Q7Z4G4 463 aaKnown RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 CCDC91Q7Z6B0 441 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 C5orf24Q7Z6I8 188 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 PRUNE1Q86TP1 453 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 UBQLNLQ8IYU4 475 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 NFAM1Q8NET5 270 aaPredicted RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 PIBF1Q8WXW3 757 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 PYCR2Q96C36 320 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 PAXXQ9BUH6 204 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 TEX13AQ9BXU3 409 aaPredicted RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 KNSTRNQ9Y448 316 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 RAD54L2Q9Y4B4 1467 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 SOGA1O94964 1423 aa3□□□□□ -1.93
LINC01040-201ENST00000425048 DHX29Q7Z478 1369 aaKnown RBP3□□□□□ -1.93
LINC01040-201ENST00000425048 ITIH6Q6UXX5 1313 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 hCG_1807616A0A1W2PRN6 198 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 TCP11X1B4DZS4 312 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 FBP2O00757 339 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 STAG3L1P0CL83 205 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 SKILP12757 684 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 GOT1P17174 413 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 UBASH3AP57075 661 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 CRMP1Q14194 572 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 FASTKQ14296 549 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 PCK2Q16822 640 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 KLHL40Q2TBA0 621 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 RILPL1Q5EBL4 403 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 RFWD3Q6PCD5 774 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 MAATS1Q7Z4T9 603 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 EXOC8Q8IYI6 725 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 C10orf67Q8IYJ2 551 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 KRT222Q8N1A0 295 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 IQUBQ8NA54 791 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 FAM184AQ8NB25 1140 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 PCNPQ8WW12 178 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 MAGEB18Q96M61 343 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 RCHY1Q96PM5 261 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 GCNAQ96QF7 691 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 PCDHB18PQ96TA0 734 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 ZBP1Q9H171 429 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 XAB2Q9HCS7 855 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 PDE7BQ9NP56 450 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 ADD3Q9UEY8 706 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 DDX49Q9Y6V7 483 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 TCHHQ07283 1943 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 ROCK2O75116 1388 aaKnown RBP2.99□□□□□ -1.93
LINC01040-201ENST00000425048 CCNB3Q8WWL7 1395 aa2.99□□□□□ -1.93
LINC01040-201ENST00000425048 ZMYM4Q5VZL5 1548 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 ARAP1Q96P48 1450 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 LOC390937A0A1W2PQ73 354 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 TCRBV21S2A2A0A5A6 115 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms