RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 THOC1Q96FV9 657 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CHMP6Q96FZ7 201 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ACOX2Q99424 681 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ABHD14AQ9BUJ0 271 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ADGRE3Q9BY15 652 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ROPN1BQ9BZX4 212 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM39BQ9GZU3 492 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 WWTR1Q9GZV5 400 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 KLK15Q9H2R5 256 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SNX25Q9H3E2 840 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CDH20Q9HBT6 801 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 IL17RBQ9NRM6 502 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NRBP2Q9NSY0 501 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD10Q9NXR5 420 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HMGXB4Q9UGU5 601 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NARFQ9UHQ1 456 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CDH9Q9ULB4 789 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TBC1D24Q9ULP9 559 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ABT1Q9ULW3 272 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PCDHA12Q9UN75 941 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SLC22A14Q9Y267 594 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CARMIL1Q5VZK9 1371 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PRAMEF33A0A0G2JMD5 474 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CD8B2A6NJW9 211 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 OR2AG2A6NM03 316 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 HSPB2A8KAH6 182 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 FAM157AC9JC47 383 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ABCD4O14678 606 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ARPC3O15145 178 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 HDAC3O15379 428 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ADAM12O43184 909 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PRAMEF10O60809 474 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 LRP3O75074 770 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PROP1O75360 226 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GMNNO75496 209 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 RBMXL2O75526 392 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SCGNO76038 276 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 OR5F1O95221 314 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 RPSAP08865 295 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CD63P08962 238 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 OR2T7P0C7T2 308 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GNSP15586 552 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 EPCAMP16422 314 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ITGB6P18564 788 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 NT5EP21589 574 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 UGT1A1P22309 533 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 DGKAP23743 735 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 NDUFS1P28331 727 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 DCTDP32321 178 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 TRIM23P36406 574 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 FOLR3P41439 243 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 STAT6P42226 847 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MAGEA9P43362 315 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 RPS5P46782 204 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SLC9A3P48764 834 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CCT8P50990 548 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CYP2J2P51589 502 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 P2RX3P56373 397 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 NLRP11P59045 1033 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 VBP1P61758 197 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 RHAGQ02094 409 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CFHR1Q03591 330 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SLC18A2Q05940 514 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SLC3A1Q07837 685 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 DYRK1AQ13627 763 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 DGCR6Q14129 220 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 BTG3Q14201 252 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MELKQ14680 651 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MAPRE2Q15555 327 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 HSPB2Q16082 182 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ZC2HC1CQ53FD0 456 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 DCAF6Q58WW2 860 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PPP6R3Q5H9R7 873 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 FAM46CQ5VWP2 391 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 NKAIN2Q5VXU1 208 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 KIAA0895LQ68EN5 471 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ASPHD2Q6ICH7 369 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PLEKHA7Q6IQ23 1121 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ZSCAN25Q6NSZ9 544 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 UGT3A1Q6NUS8 523 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MFSD12Q6NUT3 480 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 FIGLAQ6QHK4 219 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PQLC2Q6ZP29 291 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GPRIN3Q6ZVF9 776 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 COPS6Q7L5N1 327 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 LINGO2Q7L985 606 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 BHLHA15Q7RTS1 189 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MDGA2Q7Z553 956 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 AMIGO1Q86WK6 493 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CCDC36Q8IYA8 594 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ADGRG5Q8IZF4 528 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 THEM5Q8N1Q8 247 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD13CQ8N6S4 541 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 OR13C9Q8NGT0 318 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF461Q8TAF7 563 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 M1APQ8TC57 530 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GRHL3Q8TE85 626 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SCFD1Q8WVM8 642 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 FAR1Q8WVX9 515 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms