RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 TLN1Q9Y490 2541 aaKnown RBP17.58■□□□□ 0.4
PRNP-202ENST00000424424 IGHV3-20A0A0C4DH32 117 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 A0A1W2PPM1 405 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 TTLL8A6PVC2 850 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 FAM227AF5H4B4 570 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 OR7A17O14581 309 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 GLRA3O75311 464 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 SBK3P0C264 359 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 PTX3P26022 381 aaPredicted RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 EXT1Q16394 746 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 DEPDC1Q5TB30 811 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 KHDRBS2Q5VWX1 349 aaKnown RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 PLAG1Q6DJT9 500 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 TTC19Q6DKK2 380 aaPredicted RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 EMBQ6PCB8 327 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 MILR1Q7Z6M3 343 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 SLC22A9Q8IVM8 553 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 TMEM151AQ8N4L1 468 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 TSLPQ969D9 159 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 PNPLA2Q96AD5 504 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 RGMAQ96B86 450 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 LMF1Q96S06 567 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 MTERF1Q99551 399 aaKnown RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 C1QTNF3Q9BXJ4 246 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 SEMA4BQ9NPR2 832 aaPredicted RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 DMRT3Q9NQL9 472 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 PTGFRNQ9P2B2 879 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 DAPP1Q9UN19 280 aa17.57■□□□□ 0.4
PRNP-202ENST00000424424 ASH1LQ9NR48 2969 aaKnown RBP17.57■□□□□ 0.4
PRNP-202ENST00000424424 SH3BGRLO75368 114 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 OTCP00480 354 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 RPS17P08708 135 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 ATP5F1P24539 256 aaPredicted RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 CERS1P27544 350 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 SSR2P43308 183 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 TSFMP43897 325 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 CCT5P48643 541 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 ARFIP1P53367 373 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 LIM2P55344 173 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 HERVK_113P63132 956 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 BTG2P78543 158 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 IFFO1Q0D2I5 559 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 MFAP5Q13361 173 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 ZRSR2Q15696 482 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 SLC6A19Q695T7 634 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 PAPD4Q6PIY7 484 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 IGFL2Q6UWQ7 119 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 ZNF595Q8IYB9 648 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 CYP4X1Q8N118 509 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 OR52B6Q8NGF0 335 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 M1APQ8TC57 530 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 BRIX1Q8TDN6 353 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 EPS8L3Q8TE67 593 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 NSUN5Q96P11 429 aaKnown RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 CDK15Q96Q40 435 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 ERVK-6Q9BXR3 956 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 TRIM4Q9C037 500 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 OR51B5Q9H339 312 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 LYRM4Q9HD34 91 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 PRTFDC1Q9NRG1 225 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 PSD3Q9NYI0 1048 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■■■□□ 18.3
PRNP-202ENST00000424424 TEKT2Q9UIF3 430 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 B3GNT3Q9Y2A9 372 aa17.56■□□□□ 0.4
PRNP-202ENST00000424424 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
PRNP-202ENST00000424424 TLDC2A0PJX2 215 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 SYNDIG1LA6NDD5 238 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 FOXE1O00358 373 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 SUPT7LO94864 414 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 ITGAMP11215 1152 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 MAOAP21397 527 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 HIST1H1TP22492 207 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 ATP5A1P25705 553 aaKnown RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 HSD17B7P56937 341 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 RPS13P62277 151 aaKnown RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 IFT88Q13099 833 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 SLC13A2Q13183 592 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 ERCC6LQ2NKX8 1250 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 C10orf62Q5T681 223 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 OR4C11Q6IEV9 310 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 LINC00696Q6ZRV3 163 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 RIBC1Q8N443 379 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 SIRT6Q8N6T7 355 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 ACOT4Q8N9L9 421 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 WDR20Q8TBZ3 569 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 ZNF483Q8TF39 744 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 CCDC126Q96EE4 140 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 WDR77Q9BQA1 342 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 ILKAPQ9H0C8 392 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 ZBTB20Q9HC78 741 aaPredicted RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 GRID1Q9ULK0 1009 aa17.55■□□□□ 0.4
PRNP-202ENST00000424424 FLNBO75369 2602 aaKnown RBP17.55■□□□□ 0.4
PRNP-202ENST00000424424 CPAMD8Q8IZJ3 1885 aa17.54■□□□□ 0.4
PRNP-202ENST00000424424 BSNQ9UPA5 3926 aa17.54■□□□□ 0.4
PRNP-202ENST00000424424 TCRBV16S1A1N1A0A5B0 115 aa17.54■□□□□ 0.4
PRNP-202ENST00000424424 DYTNA2CJ06 578 aa17.54■□□□□ 0.4
PRNP-202ENST00000424424 SAP18O00422 153 aaKnown RBP17.54■□□□□ 0.4
PRNP-202ENST00000424424 RTCAO00442 366 aaKnown RBP17.54■□□□□ 0.4
PRNP-202ENST00000424424 DLX3O60479 287 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms