RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1W2PPB8 328 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 A0A1W2PRS3 328 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 URADA6NGE7 173 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 KIR3DP1A8MWS1 328 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SLC16A5O15375 505 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 OR6B1O95007 311 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SERPIND1P05546 499 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 HEXAP06865 529 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 C8GP07360 202 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 F7P08709 466 aaPredicted RBP15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 TPSB2P20231 275 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 UQCRC1P31930 480 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 MAGEA5P43359 124 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 MAN2A2P49641 1150 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 FOXO1Q12778 655 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SP140Q13342 867 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 KEAP1Q14145 624 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SLC10A1Q14973 349 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 TPSAB1Q15661 275 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 CCNG2Q16589 344 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 BBS9Q3SYG4 887 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 FBXL19-AS1Q494R0 122 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SEL1L2Q5TEA6 688 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 ZNF470Q6ECI4 717 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 DRICH1Q6PGQ1 229 aaPredicted RBP15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 RAD9BQ6WBX8 426 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SCUBE1Q8IWY4 988 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 CA13Q8N1Q1 262 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 TBC1D19Q8N5T2 526 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 OR56A3Q8NH54 315 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 RASL10BQ96S79 203 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 SH3GL2Q99962 352 aa15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 FBXO6Q9NRD1 293 aaPredicted RBP15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 PNO1Q9NRX1 252 aaKnown RBP15.51■□□□□ 0.07
CHCHD3-202ENST00000423635 TCRBV7S3A2A0A539 114 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 MAGEB16A2A368 324 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 HSPB2A8KAH6 182 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 FAM171A2A8MVW0 826 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 HCN1O60741 890 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 SOX3P41225 446 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 RAB8AP61006 207 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 DHX34Q14147 1143 aaKnown RBP15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 HSPB2Q16082 182 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 ZNF750Q32MQ0 723 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 HECTD2Q5U5R9 776 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 DUPD1Q68J44 220 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 KRTAP1-3Q8IUG1 177 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 GOLM1Q8NBJ4 401 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 EEF1AKMT1Q8WVE0 214 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 SLCO2A1Q92959 643 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 RNASE6Q93091 150 aaKnown RBP15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 OR4K3Q96R72 315 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 AARSD1Q9BTE6 412 aaKnown RBP15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 CNPPD1Q9BV87 410 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 RHBGQ9H310 441 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 PLEKHF2Q9H8W4 249 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 LIN28AQ9H9Z2 209 aaKnown RBP15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 SAMD15Q9P1V8 674 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 MPDZO75970 2070 aa15.5■□□□□ 0.07
CHCHD3-202ENST00000423635 AVILO75366 819 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 CELA3AP09093 270 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 HIST1H2AGP0C0S8 130 aaPredicted RBP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 HIST1H2ADP20671 130 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 HSD17B7P56937 341 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 THOC5Q13769 683 aaKnown RBP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 SIX1Q15475 284 aaPredicted RBP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 CATSPEREQ5SY80 951 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 RTL4Q6ZR62 310 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 SEM1Q6ZVN7 128 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 CHSY3Q70JA7 882 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 PALM2Q8IXS6 379 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 LMNTD2Q8IXW0 634 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 ANKRD53Q8N9V6 530 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 RELL2Q8NC24 303 aaPredicted RBP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 TRPV3Q8NET8 790 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 LRRC46Q96FV0 321 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 SCYL1Q96KG9 808 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 HIST1H2AHQ96KK5 128 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 SGCZQ96LD1 299 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 HIST1H2AJQ99878 128 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 H2AFJQ9BTM1 129 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 SPNS1Q9H2V7 528 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 KLHL31Q9H511 634 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 NEUROD4Q9HD90 331 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 ALKBH4Q9NXW9 302 aa15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 FOXD3Q9UJU5 478 aaPredicted RBP15.49■□□□□ 0.07
CHCHD3-202ENST00000423635 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 ATP6AP2A0A1C7CYW4 349 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 CTAGE15A4D2H0 777 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 KIAA1324LA8MWY0 1029 aaPredicted RBP15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 G3V3Y1 287 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 TGFBR3LH3BV60 316 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 ATP6AP2O75787 350 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 HAUS5O94927 633 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 EPXP11678 715 aa15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 ENDOUP21128 410 aaKnown RBP15.48■□□□□ 0.07
CHCHD3-202ENST00000423635 PPP2R1BP30154 601 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms