RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LTBQ06643 244 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 C1orf185Q5T7R7 199 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SLC22A10Q63ZE4 541 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FAM131BQ86XD5 332 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MB21D2Q8IYB1 491 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM130Q8N3G9 435 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TCAIMQ8N3R3 496 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 C1orf162Q8NEQ5 155 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OR9A4Q8NGU2 314 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SNF8Q96H20 258 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CAMK1GQ96NX5 476 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 VAT1Q99536 393 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CCT7Q99832 543 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ACAT2Q9BWD1 397 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRRG3Q9BZD7 231 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ENKD1Q9H0I2 346 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RDH14Q9HBH5 336 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF160Q9HCG1 818 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CUTCQ9NTM9 273 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 BEX4Q9NWD9 120 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SHOC2Q9UQ13 582 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PLEKHA6Q9Y2H5 1048 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CNTNAP5Q8WYK1 1306 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF407Q9C0G0 2248 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FUOMA2VDF0 154 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FAM166BA8MTA8 275 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TTC34A8MYJ7 566 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM189-UBE2V1I3L0A0 370 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 EIF3HO15372 352 aaKnown RBP eCLIP3.39□□□□□ -1.874e-6■■■□□ 19.1
TOP2A-201ENST00000423485 CD3EAPO15446 510 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 COCHO43405 550 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRAMEF10O60809 474 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DAB1O75553 588 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OTCP00480 354 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OAS2P29728 719 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MAGEA12P43365 314 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 HK3P52790 923 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PNLIPRP1P54315 467 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ABATP80404 500 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 GUCY1A3Q02108 690 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 IRF8Q02556 426 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 HYAL2Q12891 473 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 BNIP3Q12983 259 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB17Q13105 803 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 IGFBP7Q16270 282 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 HFEQ30201 348 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRAMEF13Q5VWM6 474 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RESP18Q5W5W9 173 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 LINGO4Q6UY18 593 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RTL4Q6ZR62 310 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CD163Q86VB7 1156 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CPNE8Q86YQ8 564 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CBWD2Q8IUF1 395 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TBC1D10CQ8IV04 446 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MCOLN2Q8IZK6 566 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PDIK1LQ8N165 341 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FAM172AQ8WUF8 416 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF689Q96CS4 500 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SERPINB12Q96P63 405 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 WDR24Q96S15 920 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SYT11Q9BT88 431 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CRISPLD1Q9H336 500 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC19Q9H756 370 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.39□□□□□ -1.871e-7■□□□□ 9
TOP2A-201ENST00000423485 ASXL3Q9C0F0 2248 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FER1L5A0AVI2 2057 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 BTNL10A8MVZ5 291 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 B4E171 279 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PSMD11O00231 422 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TAF4O00268 1085 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 BTN3A1O00481 513 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TNFRSF10CO14798 259 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF749O43361 778 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRAMEF2O60811 474 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SPAG6O75602 509 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 POP7O75817 140 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRAMEF1O95521 474 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ECEL1O95672 775 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PCSK2P16519 638 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TSPAN7P41732 249 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 EIF2B2P49770 351 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CHN2P52757 468 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OR1C1Q15619 314 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OASLQ15646 514 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 IFNEQ86WN2 208 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RPS19BP1Q86WX3 136 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 KRT73Q86Y46 540 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM217Q8N7C4 229 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OR4D9Q8NGE8 314 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OR5T3Q8NGG3 340 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 STT3BQ8TCJ2 826 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SP7Q8TDD2 431 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SLC5A11Q8WWX8 675 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ISL2Q96A47 359 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 POM121Q96HA1 1249 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DHRS1Q96LJ7 313 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ATF6BQ99941 703 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms