RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 LTA4HP09960 611 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 CERS1P27544 350 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 PPP2R1BP30154 601 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 MSH2P43246 934 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 CLCN2P51788 898 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TDGF1P3P51864 188 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 HNRNPFP52597 415 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 MTTPP55157 894 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 CASP6P55212 293 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 RAB38P57729 211 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 MLF1P58340 268 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TGM3Q08188 693 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 STX4Q12846 297 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 DDX39BQ13838 428 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 ZRSR2Q15696 482 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 ZKSCAN8Q15776 578 aaPredicted RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 MROH9Q5TGP6 573 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 ZNF468Q5VIY5 522 aaPredicted RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 PRAMEF9Q5VWM5 478 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 ABHD17CQ6PCB6 329 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 VN1R5Q7Z5H4 357 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 ISCA2Q86U28 154 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TEX9Q8N6V9 391 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TMEM178AQ8NBL3 297 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 FAM98AQ8NCA5 519 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 PDPRQ8NCN5 879 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 MDS2Q8NDY4 140 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TMEM52Q8NDY8 209 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 NFAM1Q8NET5 270 aaPredicted RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 OR2L5Q8NG80 312 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 KCTD4Q8WVF5 259 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 IFT81Q8WYA0 676 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 QRFPRQ96P65 431 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 SERINC2Q96SA4 455 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 CCDC77Q9BR77 488 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 PITHD1Q9GZP4 211 aaPredicted RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 VPS11Q9H270 941 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 EHD1Q9H4M9 534 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 NUDT4Q9NZJ9 180 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 COPG2Q9UBF2 871 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 OPTCQ9UBM4 332 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 SUCOQ9UBS9 1254 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 NPIPA1Q9UND3 350 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 MRPS33Q9Y291 106 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 MMACHCQ9Y4U1 282 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 ASB1Q9Y576 335 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 UTP20O75691 2785 aaKnown RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 NBASA2RRP1 2371 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 A0A087X1B8 175 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 IGKV3D-11A0A0A0MRZ8 115 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 K7EPI3 171 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 RTCAO00442 366 aaKnown RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 FCHO1O14526 889 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 ZNHIT1O43257 154 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 CTNSO60931 367 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 NEURL1O76050 574 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 ZFAND5O76080 213 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 MLYCDO95822 493 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 C1QAP02745 245 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 C2P06681 752 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 SLC35E2BP0CK96 405 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 ESRRAP11474 423 aaPredicted RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 GFAPP14136 432 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 EPB42P16452 691 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 CD22P20273 847 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 GSTM2P28161 218 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 PHBP35232 272 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 DCTP40126 519 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 CYB561P49447 251 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 LIM2P55344 173 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 HSD17B7P56937 341 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 IRF9Q00978 393 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 NAB1Q13506 487 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 RCN2Q14257 317 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 AP5B1Q2VPB7 878 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 SP5Q6BEB4 398 aaPredicted RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 MED27Q6P2C8 311 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 CHSY3Q70JA7 882 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 LRRC70Q7Z2Q7 622 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 MYLK4Q86YV6 388 aaPredicted RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 ZNF595Q8IYB9 648 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 LGI4Q8N135 537 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 TMEM132CQ8N3T6 1108 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 TMEM156Q8N614 296 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 B3GNT7Q8NFL0 401 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 UBE2E3Q969T4 207 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 NCLNQ969V3 563 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 RELTQ969Z4 430 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 TMEM125Q96AQ2 219 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 WDR34Q96EX3 536 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 SCMH1Q96GD3 660 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 SEC16BQ96JE7 1060 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 C16orf45Q96MC5 204 aaPredicted RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 ALOXE3Q9BYJ1 711 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 PHACTR1Q9C0D0 580 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 ROGDIQ9GZN7 287 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
NUP50-206ENST00000422489 PRDM7Q9NQW5 492 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 IGSF5Q9NSI5 407 aa8.68□□□□□ -1.02
NUP50-206ENST00000422489 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms