RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 M1APQ8TC57 530 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 ADAMTS18Q8TE60 1221 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 DCAKDQ8WVC6 231 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 C19orf60Q96EN9 201 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 AGPAT4Q9NRZ5 378 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 ASF1BQ9NVP2 202 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 PLA2G3Q9NZ20 509 aa20.58■□□□□ 0.89
TRAF4-204ENST00000422344 TNPO3Q9Y5L0 923 aaKnown RBP20.58■□□□□ 0.89
TRAF4-204ENST00000422344 TRIM49D1C9J1S8 452 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 FAM227AF5H4B4 570 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 DDAH2O95865 285 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 ABHD2P08910 425 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 MAGEA12P43365 314 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 TSFMP43897 325 aaKnown RBP20.57■□□□□ 0.88
TRAF4-204ENST00000422344 PIK3CGP48736 1102 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 MTTPP55157 894 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 RCN2Q14257 317 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 TECRLQ5HYJ1 363 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 CATSPER1Q8NEC5 780 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 SRFBP1Q8NEF9 429 aaKnown RBP20.57■□□□□ 0.88
TRAF4-204ENST00000422344 OR1N1Q8NGS0 311 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 ISL2Q96A47 359 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 GPR78Q96P69 363 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 SERINC2Q96SA4 455 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 ROGDIQ9GZN7 287 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.57■□□□□ 0.888e-8■■■□□ 17.6
TRAF4-204ENST00000422344 ACTR8Q9H981 624 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 TMCO1Q9UM00 188 aa20.57■□□□□ 0.88
TRAF4-204ENST00000422344 MRPS33Q9Y291 106 aaKnown RBP20.57■□□□□ 0.88
TRAF4-204ENST00000422344 CLDN4O14493 209 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 KLK8O60259 260 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 SNRPAP09012 282 aaKnown RBP20.56■□□□□ 0.88
TRAF4-204ENST00000422344 COL6A2P12110 1019 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 MAOAP21397 527 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 COL8A1P27658 744 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 RAB38P57729 211 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 TAS2R50P59544 299 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 BTG2P78543 158 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 RUNX2Q13950 521 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 GRHL2Q6ISB3 625 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 ABHD17CQ6PCB6 329 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 LAS2Q8IYD9 372 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 PLD6Q8N2A8 252 aaKnown RBP20.56■□□□□ 0.88
TRAF4-204ENST00000422344 HAS2Q92819 552 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 ZNF354BQ96LW1 612 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 QRFPRQ96P65 431 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 KCNC2Q96PR1 638 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 F2RL3Q96RI0 385 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 MMP25Q9NPA2 562 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 STMN3Q9NZ72 180 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 ABI3Q9P2A4 366 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 ADGRE2Q9UHX3 823 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 MMACHCQ9Y4U1 282 aa20.56■□□□□ 0.88
TRAF4-204ENST00000422344 TRAV17A0A0B4J275 112 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 SMIM24O75264 130 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 F10P00742 488 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 MYBL2P10244 700 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 CERS1P27544 350 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 ARL1P40616 181 aaPredicted RBP20.55■□□□□ 0.88
TRAF4-204ENST00000422344 SLC26A5P58743 744 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 PCDH1Q08174 1060 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 DDX39BQ13838 428 aaKnown RBP20.55■□□□□ 0.88
TRAF4-204ENST00000422344 GTF2H2Q13888 395 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 E2F2Q14209 437 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 PCBP2Q15366 365 aaKnown RBP eCLIP20.55■□□□□ 0.884e-7■■■□□ 17.9
TRAF4-204ENST00000422344 TMEM35AQ53FP2 167 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 ZNF787Q6DD87 383 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 GTF2H2CQ6P1K8 395 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 CHSY3Q70JA7 882 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 AMER2Q8N7J2 671 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 PTGR2Q8N8N7 351 aaPredicted RBP20.55■□□□□ 0.88
TRAF4-204ENST00000422344 OR7G3Q8NG95 312 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 SUN3Q8TAQ9 357 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 ZNF473Q8WTR7 871 aaKnown RBP20.55■□□□□ 0.88
TRAF4-204ENST00000422344 MS4A8Q9BY19 250 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 RNF32Q9H0A6 362 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 PRTFDC1Q9NRG1 225 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 ZNF358Q9NW07 568 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 XPR1Q9UBH6 696 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 LRBAP50851 2863 aa20.55■□□□□ 0.88
TRAF4-204ENST00000422344 RIPK2O43353 540 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 WDPCPO95876 746 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 TBX6O95947 436 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-204ENST00000422344 TGFB1P01137 390 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 TNFSF10P50591 281 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 PHEXP78562 749 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 SLC13A2Q13183 592 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 LIPJQ5W064 366 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 METTL2BQ6P1Q9 378 aaKnown RBP20.54■□□□□ 0.88
TRAF4-204ENST00000422344 MAMDC2Q7Z304 686 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-204ENST00000422344 GOLGA7Q7Z5G4 137 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 SLC5A8Q8N695 610 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 FAM47BQ8NA70 645 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 REPS1Q96D71 796 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 CMTM7Q96FZ5 175 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 CENPKQ9BS16 269 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 TBCDQ9BTW9 1192 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 IPPKQ9H8X2 491 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 PCDHGA11Q9Y5H2 935 aa20.54■□□□□ 0.88
TRAF4-204ENST00000422344 SPACA6W5XKT8 324 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms