RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TMEM132CQ8N3T6 1108 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 Q8N9G6 341 aaPredicted RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ACOT4Q8N9L9 421 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 KCT2Q8NC54 265 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 RBM15BQ8NDT2 890 aaKnown RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 MVB12AQ96EY5 273 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 TSSK3Q96PN8 268 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 BHLHE41Q9C0J9 482 aaPredicted RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ATAD3AQ9NVI7 634 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM120CQ9NX05 1096 aaKnown RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 MAP10Q9P2G4 905 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ASB4Q9Y574 426 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 PCDHGA1Q9Y5H4 931 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ASPDHA6ND91 283 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 GABRR3A8MPY1 467 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 C4orf51C9J302 202 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 RNASET2O00584 256 aaKnown RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 ANGPT2O15123 496 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 P2RX6O15547 441 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 TMPRSS11DO60235 418 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM58BPP0C7Q3 252 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 MYF5P13349 255 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 SSR2P43308 183 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 SHC2P98077 582 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 ACY1Q03154 408 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 ACTN3Q08043 901 aaPredicted RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 GRM7Q14831 915 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 NDUFA9Q16795 377 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM214AQ32MH5 1076 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 ANXA8L1Q5VT79 327 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 REP15Q6BDI9 236 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 TLDC1Q6P9B6 456 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 C16orf89Q6UX73 402 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 USP53Q70EK8 1073 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 PGAM4Q8N0Y7 254 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 NUDT22Q9BRQ3 303 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 GPATCH1Q9BRR8 931 aaKnown RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 GID8Q9NWU2 228 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 BTNL2Q9UIR0 455 aa13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
SHMT1P1-201ENST00000419974 TPRP12270 2363 aaKnown RBP13.52□□□□□ -0.24
SHMT1P1-201ENST00000419974 IGHV5-10-1A0A0J9YXX1 117 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 BLACEA4D250 179 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 D6RAR5 112 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 SAP18O00422 153 aaKnown RBP13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 GYG2O15488 501 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 GSC2O15499 205 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PROM1O43490 865 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 HCRTR1O43613 425 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 RASSF9O75901 435 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 SERPIND1P05546 499 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 S100A3P33764 101 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 TRPC1P48995 793 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PLA2G16P53816 162 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 VSX2P58304 361 aaPredicted RBP13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 TAS2R50P59544 299 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 E2F1Q01094 437 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 DMTNQ08495 405 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 ART3Q13508 389 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 MLC1Q15049 377 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 CEBPEQ15744 281 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 HKDC1Q2TB90 917 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 FAM174BQ3ZCQ3 159 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPANXN4Q5MJ08 99 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PRMT9Q6P2P2 845 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PIP4P1Q86T03 277 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 GPR180Q86V85 440 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 NAXDQ8IW45 347 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 DSELQ8IZU8 1212 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 KRTCAP2Q8N6L1 136 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 GOT1L1Q8NHS2 421 aaPredicted RBP13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 GTF2H4Q92759 462 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 RCN3Q96D15 328 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 KCMF1Q9P0J7 381 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms