RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 AK4P27144 223 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 DCTP40126 519 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SLC19A1P41440 591 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ITGA1P56199 1179 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 PCBP3P57721 371 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 CYP4F2P78329 520 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TFF2Q03403 129 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 RELAQ04206 551 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TDGQ13569 410 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 KRT33BQ14525 404 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 KIR2DS3Q14952 304 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 C16orf72Q14CZ0 275 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZNF630Q2M218 657 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 RFX4Q33E94 735 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 LIN52Q52LA3 116 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZC3H12BQ5HYM0 836 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 FOXB2Q5VYV0 432 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 KIAA1614Q5VZ46 1190 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SAXO2Q658L1 398 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 OR4C11Q6IEV9 310 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZNF852Q6ZMS4 543 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZNF793Q6ZN11 406 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 AMIGO1Q86WK6 493 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZDHHC13Q8IUH4 622 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZDHHC21Q8IVQ6 265 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 MMP21Q8N119 569 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 NAGSQ8N159 534 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SLC22A18ASQ8N1D0 253 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SRFBP1Q8NEF9 429 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 HMGB4Q8WW32 186 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 LCN9Q8WX39 176 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TSACCQ96A04 125 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 MS4A6EQ96DS6 147 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 NEURL3Q96EH8 262 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 NRBF2Q96F24 287 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 C7orf34Q96L11 122 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TEFMQ96QE5 360 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 DPH2Q9BQC3 489 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ORAI3Q9BRQ5 295 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 DPH7Q9BTV6 452 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 RBM4Q9BWF3 364 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 YTHDF1Q9BYJ9 559 aaKnown RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 CXorf56Q9H5V9 222 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 C6orf106Q9H6K1 298 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SLAMF7Q9NQ25 335 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 MIEF1Q9NQG6 463 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SIRT3Q9NTG7 399 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 ZSCAN32Q9NX65 697 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SPHK1Q9NYA1 384 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 WSB2Q9NYS7 404 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 NDUFA13Q9P0J0 144 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 IFT80Q9P2H3 777 aaPredicted RBP8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 SPASTQ9UBP0 616 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 UTS2RQ9UKP6 389 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 PCDHGA2Q9Y5H1 932 aa8.62□□□□□ -1.03
LINCMD1-201ENST00000418518 PRAMEF33A0A0G2JMD5 474 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SMIM31A0A1B0GVY4 71 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 OR5K4A6NMS3 321 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 C4orf51C9J302 202 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 G3V2T6 193 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 H6PDO95479 791 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 TFAP2AP05549 437 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 NUDT7P0C024 238 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 IGFBP4P22692 258 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ACTR1BP42025 376 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SSR2P43308 183 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 RPL5P46777 297 aaKnown RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 RXRGP48443 463 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ACTR1AP61163 376 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 RPS15AP62244 130 aaKnown RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 UBE2IP63279 158 aaKnown RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 TUBA4AP68366 448 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 LRRC32Q14392 662 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SLC5A12Q1EHB4 618 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 LRRC23Q53EV4 343 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 CRB2Q5IJ48 1285 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 COX20Q5RI15 118 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 OR2T5Q6IEZ7 315 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 KRT80Q6KB66 452 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 TRIM40Q6P9F5 258 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 CHRDL2Q6WN34 429 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 Q6ZS52 159 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 Q6ZSR6 202 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 VN1R4Q7Z5H5 301 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 OR2L5Q8NG80 312 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 OR13H1Q8NG92 308 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 OR2T29Q8NH02 315 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 NT5CQ8TCD5 201 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 PNPT1Q8TCS8 783 aaKnown RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SFXN5Q8TD22 340 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SLC22A18Q96BI1 424 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms