RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PYGLP06737 847 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALPIP09923 528 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRR23D2P0DMB1 279 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 MYL2P10916 166 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PSMC3P17980 439 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 BGNP21810 368 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 FCARP24071 287 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CRABP2P29373 138 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALDH3A1P30838 453 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 FOXN2P32314 431 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 GNALP38405 381 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPAM1P38567 509 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 MAGEA12P43365 314 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LEPRP48357 1165 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TTPAP49638 278 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 STC1P52823 247 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 POLR2LP62875 67 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ACVR1Q04771 509 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CACNG1Q06432 222 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 DMTNQ08495 405 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SF3A3Q12874 501 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 RUNX3Q13761 415 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PDE1CQ14123 709 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 IHHQ14623 411 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PTPRCAPQ14761 206 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CHI3L2Q15782 390 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TYSND1Q2T9J0 566 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 MYLK3Q32MK0 819 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALG10Q5BKT4 473 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALG10BQ5I7T1 473 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZDHHC20Q5W0Z9 365 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TANGO2Q6ICL3 276 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ERAP2Q6P179 960 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CNSTQ6PJW8 725 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM151BQ6UXP7 276 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 GDPD4Q6W3E5 623 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM184AQ6ZMB5 413 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 Q6ZTK2 550 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TAS2R42Q7RTR8 314 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPATA21Q7Z572 469 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 C11orf96Q7Z7L8 435 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 GALNT7Q86SF2 657 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 DSG4Q86SJ6 1040 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LDB1Q86U70 411 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ADIPOR2Q86V24 386 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LCA5Q86VQ0 697 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CAMK1DQ8IU85 385 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 NUDCD3Q8IVD9 361 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ADHFE1Q8IWW8 467 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 STK40Q8N2I9 435 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TTC30BQ8N4P2 665 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 C7orf57Q8NEG2 295 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 RAB3IL1Q8TBN0 382 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 RDH11Q8TC12 318 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PPP4R1Q8TF05 950 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 KCTD4Q8WVF5 259 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PIH1D2Q8WWB5 315 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SORCS1Q8WY21 1168 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR8D1Q8WZ84 308 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUSD6Q92537 303 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 INPP5DQ92835 1189 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 NEUROG1Q92886 237 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 EXT2Q93063 718 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 KIAA1191Q96A73 305 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELSPBP1Q96BH3 223 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CDKN2AIPNLQ96HQ2 116 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PPP1R16AQ96I34 528 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF641Q96N77 438 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 NECTIN4Q96NY8 510 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 MYADMQ96S97 322 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELAC2Q9BQ52 826 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TSSK1BQ9BXA7 367 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM120AQ9BXJ8 343 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PITPNM3Q9BZ71 974 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LINC00597Q9H2U6 94 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUDS3Q9H7L9 328 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ECT2Q9H8V3 914 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CAB39LQ9H9S4 337 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 MAGEE1Q9HCI5 957 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SPAG4Q9NPE6 437 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TM7SF3Q9NS93 570 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SIRT3Q9NTG7 399 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 HIF1ANQ9NWT6 349 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 GEMIN8Q9NWZ8 242 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CDH22Q9UJ99 828 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CRLS1Q9UJA2 301 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRMT6Q9UJA5 497 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 APPL1Q9UKG1 709 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLA2G4CQ9UP65 541 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 CRYL1Q9Y2S2 319 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 ACOT9Q9Y305 439 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLLPQ9Y342 182 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 COMMD10Q9Y6G5 202 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRK1Q38SD2 2015 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 DOCK8Q8NF50 2099 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 LOC105369274A0A096LPK9 316 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LOC102723532A0A0G2JNH3 316 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 GLYATL1P3A0A0U1RQE8 302 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms