RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 DOLPP1Q86YN1 238 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 CPSF7Q8N684 471 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 ACBD4Q8NC06 268 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 SUN3Q8TAQ9 357 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 PTCHD1Q96NR3 888 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 QRFPRQ96P65 431 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 TRIM8Q9BZR9 551 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 PELI2Q9HAT8 420 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 GPAMQ9HCL2 828 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 LRFN1Q9P244 771 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 ZNF490Q9ULM2 529 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 NPIPA1Q9UND3 350 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 PPIEQ9UNP9 301 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 POLQO75417 2590 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 CACNA1CQ13936 2221 aa11.62□□□□□ -0.55
NCKIPSD-203ENST00000415281 NPEPPSL1A6NEC2 478 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 SAGE2PA6NJ88 616 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 ENO4A6NNW6 628 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 A8MUA0 341 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 POC1B-GALNT4F8VUJ3 575 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 NME2P1O60361 137 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 PRMT3O60678 531 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 SLU7O95391 586 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 SERPIND1P05546 499 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 MYBL2P10244 700 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 EPORP19235 508 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 NME2P22392 152 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 HTR1EP28566 365 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 KCNC1P48547 511 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 CDKL1Q00532 357 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 POU4F1Q01851 419 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 TSNQ15631 228 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 C16orf47Q6ZP98 133 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 SCUBE1Q8IWY4 988 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 SPATA6LQ8N4H0 392 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 ANKRD7Q92527 254 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 RHBDF1Q96CC6 855 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 DMRTA2Q96SC8 542 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 GPR22Q99680 433 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 TMEM79Q9BSE2 394 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 ACSS3Q9H6R3 686 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 MEMO1Q9Y316 297 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 OARD1Q9Y530 152 aa11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-203ENST00000415281 HCFC1P51610 2035 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 A0A0G2JN53 185 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 LRIT2A6NDA9 550 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ZNF354AO60765 605 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 UQCRHP07919 91 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 SERPINA6P08185 405 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 C1GALT1C1LP0DN25 315 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 STMN1P16949 149 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 CD22P20273 847 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 EEF1DP29692 281 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 PTGER1P34995 402 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 HLCSP50747 726 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ALDH6A1Q02252 535 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ILF2Q12905 390 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 NAB1Q13506 487 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 BMPR2Q13873 1038 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ADPRMQ3LIE5 342 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 FBXO48Q5FWF7 155 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 TOR1AIP1Q5JTV8 583 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 MROH9Q5TGP6 573 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 RAPH1Q70E73 1250 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 MDGA2Q7Z553 956 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 UBE3DQ7Z6J8 389 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 CMC1Q7Z7K0 106 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 TMPRSS11BQ86T26 416 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 MARVELD2Q8N4S9 558 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 NKAPQ8N5F7 415 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 SLC5A8Q8N695 610 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ATL1Q8WXF7 558 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ESAMQ96AP7 390 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 MS4A6EQ96DS6 147 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 TSPAN17Q96FV3 270 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 TRIM54Q9BYV2 358 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 RHBGQ9H310 441 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 ANKZF1Q9H8Y5 726 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 CLK4Q9HAZ1 481 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 HIVEP1P15822 2718 aa11.6□□□□□ -0.55
NCKIPSD-203ENST00000415281 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 PINLYPA6NC86 204 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 INHBAP08476 426 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 SNRPB2P08579 225 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 CCDC166P0CW27 439 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 CD46P15529 392 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 AGAP20933 346 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 GGT5P36269 586 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 MSH2P43246 934 aa11.59□□□□□ -0.55
NCKIPSD-203ENST00000415281 RAB10P61026 200 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms