RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 A0A0G2JN53 185 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 SPAARA0A1B0GVQ0 90 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 H0YIG0 161 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 EBAG9O00559 213 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 TBX19O60806 448 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CSO75390 466 aaKnown RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 DRD2P14416 443 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CERS1P27544 350 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 ZFP36L2P47974 494 aaKnown RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 TAS2R50P59544 299 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 KLC1Q07866 573 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 EIF3IQ13347 325 aaKnown RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 RUNX2Q13950 521 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 AGKQ53H12 422 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 PAOXQ6QHF9 649 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 GPR180Q86V85 440 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 MTERF3Q96E29 417 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 TSSK3Q96PN8 268 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 NDC1Q9BTX1 674 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 TUBB6Q9BUF5 446 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 DPY30Q9C005 99 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CLMPQ9H6B4 373 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 MS4A12Q9NXJ0 267 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 ATP6V1HQ9UI12 483 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CDC14AQ9UNH5 594 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 EXO1Q9UQ84 846 aaKnown RBP13.5□□□□□ -0.25
SF3B1-204ENST00000414963 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 PCDHB3Q9Y5E6 796 aa13.5□□□□□ -0.25
SF3B1-204ENST00000414963 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 DSCR3O14972 297 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PROM1O43490 865 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 ONECUT2O95948 504 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 B3GALT4O96024 378 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 HBQ1P09105 142 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 CCL4P13236 92 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 IL1RNP18510 177 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 SDHBP21912 280 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 IL12AP29459 219 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 RPL3P39023 403 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 AVPR1BP47901 424 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 POLR2JP52435 117 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 HNRNPH2P55795 449 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 FOXM1Q08050 763 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PDE7AQ13946 482 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 RCAN2Q14206 197 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 HEPACAMQ14CZ8 416 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 HES3Q5TGS1 186 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 RHBDD2Q6NTF9 364 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 MED25Q71SY5 747 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PRSS41Q7RTY9 318 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 R3HCC1LQ7Z5L2 792 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 TMPRSS12Q86WS5 348 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PPP1R3BQ86XI6 285 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 TMEM132CQ8N3T6 1108 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 OR9I1Q8NGQ6 314 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 RP9Q8TA86 221 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 CMTM5Q96DZ9 223 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 ZBTB18Q99592 522 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 REEP4Q9H6H4 257 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 TAS2R7Q9NYW3 318 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 EHD3Q9NZN3 535 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 CCDC167Q9P0B6 97 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 CDV3Q9UKY7 258 aaKnown RBP13.49□□□□□ -0.25
SF3B1-204ENST00000414963 DAPP1Q9UN19 280 aa13.49□□□□□ -0.25
SF3B1-204ENST00000414963 CCDC187A0A096LP49 1063 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 A0A0A6YYC8 382 aaPredicted RBP13.48□□□□□ -0.25
SF3B1-204ENST00000414963 A0A1B0GX78 115 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 A0A1W2PR48 441 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 I3L1I5 382 aaPredicted RBP13.48□□□□□ -0.25
SF3B1-204ENST00000414963 SGK494L7N484 410 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 SCAMP2O15127 329 aaKnown RBP13.48□□□□□ -0.25
SF3B1-204ENST00000414963 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
SF3B1-204ENST00000414963 IL6P05231 212 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
SF3B1-204ENST00000414963 IL3P08700 152 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 FURINP09958 794 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 CD1EP15812 388 aa13.48□□□□□ -0.25
SF3B1-204ENST00000414963 DDCP20711 480 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms