RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 THAP11Q96EK4 314 aa14.53□□□□□ -0.08
CPNE1-208ENST00000414711 SCYL1Q96KG9 808 aa14.53□□□□□ -0.08
CPNE1-208ENST00000414711 RASL10BQ96S79 203 aa14.53□□□□□ -0.08
CPNE1-208ENST00000414711 LIN28AQ9H9Z2 209 aaKnown RBP14.53□□□□□ -0.08
CPNE1-208ENST00000414711 SEMA4BQ9NPR2 832 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-208ENST00000414711 SACM1LQ9NTJ5 587 aa14.53□□□□□ -0.08
CPNE1-208ENST00000414711 USF3Q68DE3 2245 aa14.53□□□□□ -0.08
CPNE1-208ENST00000414711 RAI1Q7Z5J4 1906 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-208ENST00000414711 hCG_1818297A0A087WSY0 165 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 A8MV72 311 aaPredicted RBP14.52□□□□□ -0.09
CPNE1-208ENST00000414711 ERN1O75460 977 aaKnown RBP14.52□□□□□ -0.09
CPNE1-208ENST00000414711 ZFAND5O76080 213 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 IL18BPO95998 194 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 HSD17B2P37059 387 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 ATP5J2P56134 94 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 THEMIS2Q5TEJ8 643 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 ZNF534Q76KX8 674 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 LIX1Q8N485 282 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 GOLM1Q8NBJ4 401 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 TRIM58Q8NG06 486 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 TM4SF19Q96DZ7 209 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 PIK3IP1Q96FE7 263 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 PKP4Q99569 1192 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 NECTIN3Q9NQS3 549 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 PRDM9Q9NQV7 894 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 FAM114A2Q9NRY5 505 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 MYOTQ9UBF9 498 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 NDRG3Q9UGV2 375 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 ATG4BQ9Y4P1 393 aa14.52□□□□□ -0.09
CPNE1-208ENST00000414711 CR1P17927 2039 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 C15orf38-AP3S2A0A0A6YYH1 394 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 GRID2IPA4D2P6 1211 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 E7ENX8 843 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 CTIFO43310 598 aaKnown RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SPOPO43791 374 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 GALR3O60755 368 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SLC16A8O95907 504 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 P04436 131 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SLC35G6P0C7Q6 338 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 CTNNA2P26232 953 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 COILP38432 576 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 TAP2Q03519 686 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 DEFB134Q4QY38 66 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 FASTKD1Q53R41 847 aaKnown RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 LUZP2Q86TE4 346 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 LDB1Q86U70 411 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SLC26A11Q86WA9 606 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 AFAP1L2Q8N4X5 818 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 OR4L1Q8NH43 312 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 ZNF480Q8WV37 535 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SLC13A3Q8WWT9 602 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 NTNG2Q96CW9 530 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SGCZQ96LD1 299 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 PLA2G12AQ9BZM1 189 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 ZNF701Q9NV72 531 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 TMEM184CQ9NVA4 438 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 SLC2A6Q9UGQ3 507 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 CDC42EP3Q9UKI2 254 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 PPIEQ9UNP9 301 aaKnown RBP14.51□□□□□ -0.09
CPNE1-208ENST00000414711 CAPN6Q9Y6Q1 641 aa14.51□□□□□ -0.09
CPNE1-208ENST00000414711 MBD3L3A6NE82 208 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 APOC4-APOC2K7ER74 178 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 WWP2O00308 870 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 APOC2P02655 101 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 CCL3P10147 92 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 COMTP21964 271 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 ATP5DP30049 168 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 TRPC1P48995 793 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 SKP1P63208 163 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 AARS2Q5JTZ9 985 aaKnown RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 RNF187Q5TA31 235 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 HECTD2Q5U5R9 776 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 PLEKHM3Q6ZWE6 761 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 PEX26Q7Z412 305 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 CDKL3Q8IVW4 592 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 C17orf53Q8N3J3 647 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 LRRC57Q8N9N7 239 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 ZNF740Q8NDX6 193 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 MBD3L2Q8NHZ7 208 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 TMEM171Q8WVE6 324 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 IGFBPL1Q8WX77 278 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 SREK1Q8WXA9 508 aaKnown RBP14.5□□□□□ -0.09
CPNE1-208ENST00000414711 ROBO4Q8WZ75 1007 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 REG4Q9BYZ8 158 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 CXorf56Q9H5V9 222 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 LRRC40Q9H9A6 602 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 ACKR4Q9NPB9 350 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 AMFRQ9UKV5 643 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 EML6Q6ZMW3 1958 aa14.5□□□□□ -0.09
CPNE1-208ENST00000414711 PSIP1O75475 530 aaKnown RBP14.49□□□□□ -0.09
CPNE1-208ENST00000414711 RFPL3SP0C7P2 107 aa14.49□□□□□ -0.09
CPNE1-208ENST00000414711 HRH2P25021 359 aa14.49□□□□□ -0.09
CPNE1-208ENST00000414711 GPR143P51810 404 aa14.49□□□□□ -0.09
CPNE1-208ENST00000414711 SRSF2Q01130 221 aaKnown RBP14.49□□□□□ -0.09
CPNE1-208ENST00000414711 CRYZQ08257 329 aaKnown RBP14.49□□□□□ -0.09
CPNE1-208ENST00000414711 CLEC12BQ2HXU8 276 aa14.49□□□□□ -0.09
CPNE1-208ENST00000414711 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms