RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	PROSER1	Q86XN7	944 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	METTL4	Q8N3J2	472 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ENDOV	Q8N8Q3	282 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ACOT4	Q8N9L9	421 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	OR51Q1	Q8NH59	317 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ADAMTS18	Q8TE60	1221 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	CKAP2	Q8WWK9	683 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	MAGEB18	Q96M61	343 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	CCT7	Q99832	543 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	MRPL1	Q9BYD6	325 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	SLC26A1	Q9H2B4	701 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	WDR54	Q9H977	334 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	PRDM7	Q9NQW5	492 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	SLC22A11	Q9NSA0	550 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	C14orf105	Q9NVL8	296 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	CTSF	Q9UBX1	484 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ADAM29	Q9UKF5	820 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	FARSA	Q9Y285	508 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	SPACA6	W5XKT8	324 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	DOCK10	Q96BY6	2186 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ASPM	Q8IZT6	3477 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	IGLV3-12	A0A075B6K2	115 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	TERT	O14746	1132 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	CHST10	O43529	356 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	SKAP2	O75563	359 aa	Predicted RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	RSL1D1	O76021	490 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	PTPN4	P29074	926 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	BSG	P35613	385 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	XCR1	P46094	333 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	OLR1	P78380	273 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	OCRL	Q01968	901 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	ACSM2A	Q08AH3	577 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	NKG7	Q16617	165 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	SYT16	Q17RD7	645 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	UGT3A2	Q3SY77	523 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	SPDYA	Q5MJ70	313 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	ACSM2B	Q68CK6	577 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	ZNF793	Q6ZN11	406 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	CRLF3	Q8IUI8	442 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	SPACA3	Q8IXA5	215 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	CA13	Q8N1Q1	262 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	KDF1	Q8NAX2	398 aa	Predicted RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	OR5T3	Q8NGG3	340 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	STT3B	Q8TCJ2	826 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	MIEF2	Q96C03	454 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	PEX11G	Q96HA9	241 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	OR1F2P	Q96R84	312 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	CCNL2	Q96S94	520 aa	Predicted RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	TUBB1	Q9H4B7	451 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	ACTL8	Q9H568	366 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	DDX31	Q9H8H2	851 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	LYRM4	Q9HD34	91 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	LYAR	Q9NX58	379 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	RAX	Q9Y2V3	346 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	PTRH2	Q9Y3E5	179 aa	Known RBP	12.44	□□□□□ -0.42
SF1-206	ENST00000413725	PCDHGA6	Q9Y5G7	932 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	MED13	Q9UHV7	2174 aa		12.44	□□□□□ -0.42
SF1-206	ENST00000413725	VSTM2B	A6NLU5	285 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	SLCO1B7	G3V0H7	640 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PIP5K1B	O14986	540 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	MYO1D	O94832	1006 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	KLK1	P06870	262 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	ZGLP1	P0C6A0	271 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	LINC00032	P0C843	101 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	JAK1	P23458	1154 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PRPH2	P23942	346 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	FOLR3	P41439	243 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	HK2	P52789	917 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	RAB38	P57729	211 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	BTK	Q06187	659 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	TBL3	Q12788	808 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	SLAMF1	Q13291	335 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	RUNX2	Q13950	521 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	NR6A1	Q15406	480 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PDCD2	Q16342	344 aa	Predicted RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	RGS9BP	Q6ZS82	235 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	COMMD6	Q7Z4G1	85 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	ZC3H7A	Q8IWR0	971 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	C1orf52	Q8N6N3	182 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	TBC1D20	Q96BZ9	403 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	C19orf60	Q96EN9	201 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	METTL2A	Q96IZ6	378 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	C7orf26	Q96N11	449 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	SORBS1	Q9BX66	1292 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	ZNF717	Q9BY31	904 aa	Predicted RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	TGIF2	Q9GZN2	237 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	RIC8B	Q9NVN3	520 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PNPO	Q9NVS9	261 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	C1orf109	Q9NX04	203 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	MS4A12	Q9NXJ0	267 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	VTI1B	Q9UEU0	232 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PHF11	Q9UIL8	331 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	TCFL5	Q9UL49	500 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	DAPP1	Q9UN19	280 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	MRPS33	Q9Y291	106 aa	Known RBP	12.43	□□□□□ -0.42
SF1-206	ENST00000413725	PTGDR2	Q9Y5Y4	395 aa		12.43	□□□□□ -0.42
SF1-206	ENST00000413725	NUP214	P35658	2090 aa	Predicted RBP	12.42	□□□□□ -0.42
SF1-206	ENST00000413725	CELSR3	Q9NYQ7	3312 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725		A0A0A6YYD5	115 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms