RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PPP2R1BP30154 601 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 NAA30Q147X3 362 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-207ENST00000413642 KLC3Q6P597 504 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 ZNF793Q6ZN11 406 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 LAS2Q8IYD9 372 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 OR7G3Q8NG95 312 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 ISL2Q96A47 359 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 TAAR6Q96RI8 345 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 RNF32Q9H0A6 362 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 AGPAT4Q9NRZ5 378 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 ANKRD10Q9NXR5 420 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 TEKT2Q9UIF3 430 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 ANGPTL3Q9Y5C1 460 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 IKBKGQ9Y6K9 419 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 FLNCQ14315 2725 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 A0A087WUV0 522 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 MYOCOSA0A1B0GUC4 107 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 ANKUB1A6NFN9 424 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 TRIM49D1C9J1S8 452 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 SAP18O00422 153 aaKnown RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 AGFG2O95081 481 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 FAM153BP0C7A2 387 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 RNF224P0DH78 156 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 SERPINB9P50453 376 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 ALDH18A1P54886 795 aaKnown RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 MTTPP55157 894 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 LIM2P55344 173 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 PCDH1Q08174 1060 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 FAM153CQ494X1 144 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 GRHL2Q6ISB3 625 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 RPUSD3Q6P087 351 aaKnown RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 CLNKQ7Z7G1 428 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 MYLK4Q86YV6 388 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 SCUBE1Q8IWY4 988 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 NFAM1Q8NET5 270 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-207ENST00000413642 FAR1Q8WVX9 515 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 ZNF354BQ96LW1 612 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 SERINC2Q96SA4 455 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 PRTFDC1Q9NRG1 225 aa24.65■■□□□ 1.54
VEGFA-207ENST00000413642 BLACEA4D250 179 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 E2F3O00716 465 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 DDX39BQ13838 428 aaKnown RBP24.64■■□□□ 1.54
VEGFA-207ENST00000413642 PCBP2Q15366 365 aaKnown RBP eCLIP24.64■■□□□ 1.541e-10■■□□□ 11.4
VEGFA-207ENST00000413642 GOLGA7Q7Z5G4 137 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 IFT20Q8IY31 132 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 ELP5Q8TE02 316 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 SORBS1Q9BX66 1292 aaKnown RBP24.64■■□□□ 1.54
VEGFA-207ENST00000413642 OR51B5Q9H339 312 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 CDCP1Q9H5V8 836 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 COPS7BQ9H9Q2 264 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-207ENST00000413642 DAPP1Q9UN19 280 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 MMACHCQ9Y4U1 282 aa24.64■■□□□ 1.54
VEGFA-207ENST00000413642 A0A088AWK7 358 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 SAGE2PA6NJ88 616 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 CYR61O00622 381 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 KRT38O76015 456 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF10P21506 573 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-207ENST00000413642 GCAP28676 217 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 TUBA3CQ13748 450 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 TUBA3EQ6PEY2 450 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 FAM180AQ6UWF9 173 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 PTGR2Q8N8N7 351 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-207ENST00000413642 UBE2E3Q969T4 207 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 SCYL1Q96KG9 808 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 MAPKAP1Q9BPZ7 522 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 ACTR8Q9H981 624 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 PNO1Q9NRX1 252 aaKnown RBP24.63■■□□□ 1.53
VEGFA-207ENST00000413642 KCMF1Q9P0J7 381 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF180Q9UJW8 692 aa24.63■■□□□ 1.53
VEGFA-207ENST00000413642 SETXQ7Z333 2677 aaKnown RBP24.62■■□□□ 1.53
VEGFA-207ENST00000413642 CCDC189A1A4V9 331 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 PRAMEF2O60811 474 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 ATP5A1P25705 553 aaKnown RBP24.62■■□□□ 1.53
VEGFA-207ENST00000413642 CD96P40200 585 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 TGM3Q08188 693 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 SLC13A2Q13183 592 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 GTF2H2Q13888 395 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 MEP1AQ16819 746 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 GTF2H2CQ6P1K8 395 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 TAOK1Q7L7X3 1001 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 GSPT2Q8IYD1 628 aaKnown RBP24.62■■□□□ 1.53
VEGFA-207ENST00000413642 ARMC2Q8NEN0 867 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 HUS1BQ8NHY5 278 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 PHF21BQ96EK2 531 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 SIGLEC12Q96PQ1 595 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 IPPKQ9H8X2 491 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 XPR1Q9UBH6 696 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 RNF11Q9Y3C5 154 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 HECTD1Q9ULT8 2610 aa24.62■■□□□ 1.53
VEGFA-207ENST00000413642 EXOC1LA0A1B0GW35 172 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 EEF1DP29692 281 aaKnown RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 HPDP32754 393 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 HSD17B7P56937 341 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF468Q5VIY5 522 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 KHDRBS2Q5VWX1 349 aaKnown RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 RPS19BP1Q86WX3 136 aaKnown RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 SLC5A8Q8N695 610 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 ACOT4Q8N9L9 421 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 ST6GALNAC3Q8NDV1 305 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 KCNC2Q96PR1 638 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms