RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 GPRC5BQ9NZH0 403 aa12.49□□□□□ -0.41
LITAF-203ENST00000413364 MAT2BQ9NZL9 334 aa12.49□□□□□ -0.41
LITAF-203ENST00000413364 VPS29Q9UBQ0 182 aa12.49□□□□□ -0.41
LITAF-203ENST00000413364 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
LITAF-203ENST00000413364 A0A0G2JMP0 313 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ANTXRLA6NF34 631 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 SOCS2O14508 198 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 ANXA6P08133 673 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 HSD3B1P14060 373 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF8P17098 575 aaPredicted RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 HSD3B2P26439 372 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 RPL10P27635 214 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 PRIM2P49643 509 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 CNTN1Q12860 1018 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 CCNYL2Q5T2Q4 361 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 LRIF1Q5T3J3 769 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 FAM46CQ5VWP2 391 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 RNF175Q8N4F7 328 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 BPIFB6Q8NFQ5 453 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 OR2T12Q8NG77 320 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 THUMPD3Q9BV44 507 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 PLA2G2FQ9BZM2 168 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 IKZF5Q9H5V7 419 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 SERHLQ9NQF3 203 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 FAM149AA5PLN7 773 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 PRMT3O60678 531 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 RNGTTO60942 597 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 PRPS1L1P21108 318 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 EIF2DP41214 584 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 ATP6AP1Q15904 470 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 PAGE2BQ5JRK9 111 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ATG9BQ674R7 924 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ADAMTSL4Q6UY14 1074 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 EPHX4Q8IUS5 362 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 PHF10Q8WUB8 498 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZNF480Q8WV37 535 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 CSF3RQ99062 836 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 C9orf16Q9BUW7 83 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 PBX4Q9BYU1 374 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 TMEM168Q9H0V1 697 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 NKX2-4Q9H2Z4 354 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 SGK2Q9HBY8 427 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 ZDHHC4Q9NPG8 344 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 DIMT1Q9UNQ2 313 aaKnown RBP12.48□□□□□ -0.41
LITAF-203ENST00000413364 KCNE2Q9Y6J6 123 aa12.48□□□□□ -0.41
LITAF-203ENST00000413364 DENND4AQ7Z401 1863 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 PDGFAP04085 211 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 TRAPPC2P0DI81 140 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 TRAPPC2BP0DI82 140 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
LITAF-203ENST00000413364 HTR3AP46098 478 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 GTDC1Q4AE62 458 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 DESI1Q6ICB0 168 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 CAPN13Q6MZZ7 669 aaPredicted RBP12.47□□□□□ -0.41
LITAF-203ENST00000413364 XKRXQ6PP77 449 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 SLCO4C1Q6ZQN7 724 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 CBR4Q8N4T8 237 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 SVOPQ8N4V2 548 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
LITAF-203ENST00000413364 IL17RDQ8NFM7 739 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 OR2L2Q8NH16 312 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 OR10A6Q8NH74 314 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 CHFRQ96EP1 664 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 CCDC120Q96HB5 630 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 COX14Q96I36 57 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 GDF15Q99988 308 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 PCDHB14Q9Y5E9 798 aa12.47□□□□□ -0.41
LITAF-203ENST00000413364 A0A0X1KG70 313 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 MGAT4DA6NG13 374 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 GSTA4O15217 222 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 SEMA3DO95025 777 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 LRATO95237 230 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 LDLRP01130 860 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 APOA1P02647 267 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.41
LITAF-203ENST00000413364 MAPK10P53779 464 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 PNLIPRP1P54315 467 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 MTAPQ13126 283 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 DDX39BQ13838 428 aaKnown RBP12.46□□□□□ -0.41
LITAF-203ENST00000413364 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
LITAF-203ENST00000413364 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms