RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NKG7Q16617 165 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 PTCHD3Q3KNS1 767 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 FTMTQ8N4E7 242 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 SAMD12Q8N8I0 201 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 RIT1Q92963 219 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 BBS4Q96RK4 519 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 GABARAPL1Q9H0R8 117 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 TMEFF2Q9UIK5 374 aaPredicted RBP13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 TBX18O95935 607 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 RPS19P39019 145 aaKnown RBP13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 MAPK8P45983 427 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 KIAA0319Q5VV43 1072 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 PM20D2Q8IYS1 436 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 XAGE5Q8WWM1 108 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 EXOSC1Q9Y3B2 195 aaKnown RBP13.37□□□□□ -0.27
CLTCL1-201ENST00000412649 REM1O75628 298 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 APOC3P02656 99 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 S100A6P06703 90 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 DDCP20711 480 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 NSG1P42857 185 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 AVPR1BP47901 424 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 HNMTP50135 292 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TMEM44Q2T9K0 475 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 COL28A1Q2UY09 1125 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 DNAJB7Q7Z6W7 309 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 CCDC190Q86UF4 302 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GATAD2BQ8WXI9 593 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 UROC1Q96N76 676 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 FUZQ9BT04 418 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 C2orf49Q9BVC5 232 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 RC3H2Q9HBD1 1191 aaKnown RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ZFP37Q9Y6Q3 630 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 B4DXG7 233 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 UPK1AO00322 258 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PCDH17O14917 1159 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 FABP7O15540 132 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PLATP00750 562 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 CDKN1CP49918 316 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TOR2AQ5JU69 321 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 CHPFQ8IZ52 775 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ZNF655Q8N720 491 aaPredicted RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 RPLP0P6Q8NHW5 317 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ST6GAL2Q96JF0 529 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 C12orf66Q96MD2 445 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GMLQ99445 158 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SLITRK2Q9H156 845 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TEX13CA0A0J9YWL9 993 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PRSS23O95084 383 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TGFBR2P37173 567 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PSMD4P55036 377 aaKnown RBP13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 CDH4P55283 916 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SELENOWP63302 87 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 PSPHP78330 225 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GPR50Q13585 617 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ZNF697Q5TEC3 545 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 RAB42Q8N4Z0 105 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 LSMEM1Q8N8F7 131 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 OR2T35Q8NGX2 323 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 NUDT15Q9NV35 164 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 NUP205Q92621 2012 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 A0A1W2PRB8 838 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 UPK3BL1B0FP48 263 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 UPK3BL2E5RIL1 263 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 ZNF670-ZNF695F2Z2N8 137 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GFRA2O00451 464 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 AKR7A2O43488 359 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SSX4O60224 188 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SCO1O75880 301 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 RBBP4Q09028 425 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TUSC3Q13454 348 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GNA13Q14344 377 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 GINS1Q14691 196 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 TIGD3Q6B0B8 471 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 HDHD5Q9BXW7 423 aa13.36□□□□□ -0.27
CLTCL1-201ENST00000412649 SCG5P05408 212 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 BMP7P18075 431 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 SLC35F1Q5T1Q4 408 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 LIN54Q6MZP7 749 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 TNFAIP8L1Q8WVP5 186 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 OR2A14Q96R47 310 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 CACNG6Q9BXT2 260 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
CLTCL1-201ENST00000412649 NMUR1Q9HB89 426 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms