RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 NKX2-6A6NCS4 301 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 A8MVJ9 347 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ERI3O43414 337 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 B3GALT2O43825 422 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 OR2J2O76002 312 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 WDR47O94967 919 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TUBB4AP04350 444 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 IFNA16P05015 189 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 C1GALT1C1LP0DN25 315 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 GNAZP19086 355 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 CHRNB4P30926 498 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PLA2G16P53816 162 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 HSD17B7P56937 341 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PLGLB1Q02325 96 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PPP1R3AQ16821 1122 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 C18orf21Q32NC0 220 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PAOXQ6QHF9 649 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TMIGD1Q6UXZ0 262 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 FRA10AC1Q70Z53 315 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 CLNKQ7Z7G1 428 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 CCDC71Q8IV32 467 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 KLHDC8AQ8IYD2 350 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 NKAPQ8N5F7 415 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 FAM47BQ8NA70 645 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ASB15Q8WXK1 588 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PLAC1Q9HBJ0 212 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PRM3Q9NNZ6 103 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 HPF1Q9NWY4 346 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 CTNNAL1Q9UBT7 734 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ZNF223Q9UK11 482 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 RNF6Q9Y252 685 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 CLCA3PQ9Y6N3 262 aa12.97□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SPG11Q96JI7 2443 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 A0A088AWK7 358 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ANKDD1BA6NHY2 528 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 FAM166BA8MTA8 275 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 NPIPA2E9PIF3 369 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 WWP2O00308 870 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PRKNO60260 465 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ZNF37AP17032 561 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TNNI3P19429 210 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 HNMTP50135 292 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 HNRNPFP52597 415 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 RAB38P57729 211 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SLBPQ14493 270 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ZNF460Q14592 562 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TERF2Q15554 542 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TESK1Q15569 626 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 GXYLT1Q4G148 440 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 XKR6Q5GH73 641 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SLCO4C1Q6ZQN7 724 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 KRT78Q8N1N4 520 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 ACBD4Q8NC06 268 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TMEM52Q8NDY8 209 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 TTLQ8NG68 377 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 OR5M9Q8NGP3 310 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 MS4A6EQ96DS6 147 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 NPLQ9BXD5 320 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 DEPPQ9NTK1 212 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 MRPS33Q9Y291 106 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 PSAT1Q9Y617 370 aa12.96□□□□□ -0.33
RAB11FIP3-202ENST00000412256 FAM95CA0A1B0GW59 222 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 FOXO6A8MYZ6 492 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 G3V3Y1 287 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 TGFBR3LH3BV60 316 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 OR6B1O95007 311 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 GPR143P51810 404 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 STX4Q12846 297 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 TSNQ15631 228 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 ZNF750Q32MQ0 723 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 HSDL2Q6YN16 418 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 SPNS3Q6ZMD2 512 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 ACAD11Q709F0 780 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 ANKMY2Q8IV38 441 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 OR5M3Q8NGP4 307 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 VPS39Q96JC1 886 aa12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-202ENST00000412256 REXO4Q9GZR2 422 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms