RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 SBSNQ6UWP8 590 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 GALNT7Q86SF2 657 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 IGDCC3Q8IVU1 814 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 CNTN4Q8IWV2 1026 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 GPATCH11Q8N954 259 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 NCLNQ969V3 563 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 CERS2Q96G23 380 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 VMP1Q96GC9 406 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 FAR2Q96K12 515 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 PBKQ96KB5 322 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 NAP1L3Q99457 506 aaPredicted RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 CCDC77Q9BR77 488 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 NAT9Q9BTE0 207 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 AICDAQ9GZX7 198 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 LIN28AQ9H9Z2 209 aaKnown RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 PPANQ9NQ55 473 aaKnown RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 DEPPQ9NTK1 212 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 SLC17A6Q9P2U8 582 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 IKZF3Q9UKT9 509 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 MMACHCQ9Y4U1 282 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 KCNE2Q9Y6J6 123 aa8.47□□□□□ -1.05
MRPL48-204ENST00000411840 MDC1Q14676 2089 aaKnown RBP8.47□□□□□ -1.05
MRPL48-204ENST00000411840 PINLYPA6NC86 204 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 LRIT2A6NDA9 550 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 TMEM200CA6NKL6 621 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 FAM166BA8MTA8 275 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 NPIPA2E9PIF3 369 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 NPIPA3F8WFD2 350 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 CDC7O00311 574 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 CLDN4O14493 209 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 NRDCO43847 1150 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PRKNO60260 465 aaPredicted RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 H2AFYO75367 372 aaKnown RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 HOXD4P09016 255 aaPredicted RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 C1GALT1C1LP0DN25 315 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 GNAZP19086 355 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 MSX1P28360 303 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 HNRNPFP52597 415 aaKnown RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 ART1P52961 327 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 NUP107P57740 925 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 STXBP1P61764 594 aaKnown RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PLGLB1Q02325 96 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 SLC13A2Q13183 592 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 BMPR2Q13873 1038 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PPP1R7Q15435 360 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 CES4AQ5XG92 561 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 FAM45BPQ6NSW5 357 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 IL20RBQ6UXL0 311 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 TMPRSS11BQ86T26 416 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 GPALPP1Q8IXQ4 340 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PSD4Q8NDX1 1056 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 TMEM52Q8NDY8 209 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 OR2M7Q8NG81 312 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 OR5M9Q8NGP3 310 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 FAM45AQ8TCE6 357 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 GRK7Q8WTQ7 553 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 MS4A6EQ96DS6 147 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 SEC16BQ96JE7 1060 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 ZNF559Q9BR84 538 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 NPLQ9BXD5 320 aaPredicted RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PLAC1Q9HBJ0 212 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PRTFDC1Q9NRG1 225 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 PNPLA3Q9NST1 481 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 MYOTQ9UBF9 498 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 KCNN3Q9UGI6 736 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 CORO1CQ9ULV4 474 aaPredicted RBP8.46□□□□□ -1.06
MRPL48-204ENST00000411840 JRKLQ9Y4A0 524 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 CLDN16Q9Y5I7 305 aa8.46□□□□□ -1.06
MRPL48-204ENST00000411840 A0A0G2JN53 185 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 A8MVJ9 347 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 PGRMC1O00264 195 aaKnown RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 WWP2O00308 870 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 DNALI1O14645 258 aaPredicted RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 ERI3O43414 337 aaKnown RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 CTNSO60931 367 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 OR6B1O95007 311 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 CNR1P21554 472 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 ACVR2AP27037 513 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 HNRNPH1P31943 449 aaKnown RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 GDF5P43026 501 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 FNTAP49354 379 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 HNMTP50135 292 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 CCZ1BP86790 482 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 CCZ1P86791 482 aaPredicted RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 ELAVL1Q15717 326 aaKnown RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 BBS9Q3SYG4 887 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 HP1BP3Q5SSJ5 553 aaPredicted RBP8.45□□□□□ -1.06
MRPL48-204ENST00000411840 TMIGD1Q6UXZ0 262 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 HSDL2Q6YN16 418 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 RGS9BPQ6ZS82 235 aa8.45□□□□□ -1.06
MRPL48-204ENST00000411840 CLNKQ7Z7G1 428 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms