RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 CCT7Q99832 543 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 NUF2Q9BZD4 464 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 ROGDIQ9GZN7 287 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
LIMS2-209ENST00000410038 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
LIMS2-209ENST00000410038 AHSPQ9NZD4 102 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 HCN3Q9P1Z3 774 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 IFT80Q9P2H3 777 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-209ENST00000410038 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
LIMS2-209ENST00000410038 URB1O60287 2271 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 CROCCQ5TZA2 2017 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 ATP6AP2A0A1C7CYW4 349 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 HDAC3O15379 428 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 B3GALT2O43825 422 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 ATP6AP2O75787 350 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 RSL1D1O76021 490 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 GBAP04062 536 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 CAPNS1P04632 268 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 PRPH2P23942 346 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 PCBP4P57723 403 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 RUNX2Q13950 521 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 NR6A1Q15406 480 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 FAM198BQ6UWH4 519 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 OVCH1Q7RTY7 1134 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 NUDT13Q86X67 352 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 WDR75Q8IWA0 830 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 ZCCHC7Q8N3Z6 543 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 CT55Q8WUE5 264 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 PPP1R36Q96LQ0 422 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 CLK4Q9HAZ1 481 aaKnown RBP13.58□□□□□ -0.24
LIMS2-209ENST00000410038 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 VTI1BQ9UEU0 232 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 ATRXP46100 2492 aa13.58□□□□□ -0.24
LIMS2-209ENST00000410038 A0A0A6YYD5 115 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 ZNF195O14628 629 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
LIMS2-209ENST00000410038 CHST10O43529 356 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 KLK1P06870 262 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 TCN2P20062 427 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 TPP2P29144 1249 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-209ENST00000410038 ACSM2AQ08AH3 577 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 KIAA0040Q15053 153 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 ACSM2BQ68CK6 577 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 MRPL14Q6P1L8 145 aaKnown RBP13.57□□□□□ -0.24
LIMS2-209ENST00000410038 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 CA13Q8N1Q1 262 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 IL22RA1Q8N6P7 574 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 OR51Q1Q8NH59 317 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 SNIP1Q8TAD8 396 aaKnown RBP13.57□□□□□ -0.24
LIMS2-209ENST00000410038 FKBP10Q96AY3 582 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 NPLQ9BXD5 320 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-209ENST00000410038 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 CTSFQ9UBX1 484 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 GIMAP2Q9UG22 337 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
LIMS2-209ENST00000410038 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 C9J4A7 227 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 POLR3GO15318 223 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 TMPRSS11DO60235 418 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 CNOT3O75175 753 aaKnown RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 PEX11AO75192 247 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 SEC22BO75396 215 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 ALBP02768 609 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 HK2P52789 917 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 RAE1P78406 368 aaKnown RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 CLN3Q13286 438 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 SLAMF1Q13291 335 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 NCF4Q15080 339 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 MRM1Q6IN84 353 aaKnown RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 GALNT18Q6P9A2 607 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 MAVSQ7Z434 540 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 METTL2AQ96IZ6 378 aaKnown RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 MAPKAP1Q9BPZ7 522 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 YIPF2Q9BWQ6 316 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 SLC26A1Q9H2B4 701 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 MKKSQ9NPJ1 570 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 RIC8BQ9NVN3 520 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 C1orf109Q9NX04 203 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 SIRT5Q9NXA8 310 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 KCMF1Q9P0J7 381 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 ZNF282Q9UDV7 671 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-209ENST00000410038 ADAM29Q9UKF5 820 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 DAPP1Q9UN19 280 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 ZZEF1O43149 2961 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 TRPC5OSA6NMA1 111 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 XCR1P46094 333 aa13.56□□□□□ -0.24
LIMS2-209ENST00000410038 LIM2P55344 173 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms