RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 CRYZQ08257 329 aaKnown RBP12.47□□□□□ -0.41
COL6A3-206ENST00000409809 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 TMEM185AQ8NFB2 350 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 OR2T11Q8NH01 316 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 KIAA1143Q96AT1 154 aaPredicted RBP12.47□□□□□ -0.41
COL6A3-206ENST00000409809 RBM18Q96H35 190 aaKnown RBP12.47□□□□□ -0.41
COL6A3-206ENST00000409809 GPR21Q99679 349 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 DOHHQ9BU89 302 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 CPQQ9Y646 472 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 GPR33Q49SQ1 333 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 GPR149Q86SP6 731 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 LACC1Q8IV20 430 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 TGM7Q96PF1 710 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 GPR22Q99680 433 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 ABCC6O95255 1503 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 TSPAN8P19075 237 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 ZDHHC24Q6UX98 284 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 RSC1A1Q92681 617 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 GNG13Q9P2W3 67 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 ADAM18Q9Y3Q7 739 aa12.47□□□□□ -0.41
COL6A3-206ENST00000409809 ARPC5O15511 151 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 TLX2O43763 284 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ARP10275 920 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ITPKBP27987 946 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 S100A7P31151 101 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 L1CAMP32004 1257 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 PPM1JQ5JR12 505 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 FAM212BQ9NTI7 297 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ZMAT5Q9UDW3 170 aaKnown RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 POLR2CP19387 275 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 KLRC2P26717 231 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 IL12BP29460 328 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 CMPK1P30085 196 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 CCR8P51685 355 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 PFKPQ01813 784 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 DNAAF1Q8NEP3 725 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 ULBP1Q9BZM6 244 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 C8orf33Q9H7E9 229 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 KCNK13Q9HB14 408 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 NR2E3Q9Y5X4 410 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 HBE1P02100 147 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 BDKRB2P30411 391 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 LBHQ53QV2 105 aaPredicted RBP12.46□□□□□ -0.41
COL6A3-206ENST00000409809 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 DPY19L2P1Q6NXN4 242 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 CLCA3PQ9Y6N3 262 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 RNF13O43567 381 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 F10P00742 488 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 HRGP04196 525 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 HEXBP07686 556 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 PRKCHP24723 683 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 KCNJ11Q14654 390 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 GPR19Q15760 415 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 TSTD2Q5T7W7 516 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 EID2Q8N6I1 236 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 OR56B2PQ8NGI1 322 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 FANK1Q8TC84 345 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 RGMAQ96B86 450 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
COL6A3-206ENST00000409809 FFAR2O15552 330 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 DIRAS3O95661 229 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 OPRL1P41146 370 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 SCIMPQ6UWF3 145 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 FAM151BQ6UXP7 276 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 ANKRD46Q86W74 232 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 POGLUT1Q8NBL1 392 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 RBCK1Q9BYM8 510 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 DERL2Q9GZP9 239 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 EIF2B4Q9UI10 523 aaKnown RBP12.46□□□□□ -0.42
COL6A3-206ENST00000409809 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.42
COL6A3-206ENST00000409809 BACE1P56817 501 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 PMS2P3Q13401 168 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 BTN1A1Q13410 526 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 NIPAL3Q6P499 406 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 S100A7AQ86SG5 101 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 RAET1EQ8TD07 263 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 ZNF578Q96N58 590 aaPredicted RBP12.46□□□□□ -0.42
COL6A3-206ENST00000409809 OR52A5Q9H2C5 316 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 INPP5EQ9NRR6 644 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 WNT7AO00755 349 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 TP73O15350 636 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 KCNAB2Q13303 367 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 ALG1LQ6GMV1 187 aa12.46□□□□□ -0.42
COL6A3-206ENST00000409809 PDE12Q6L8Q7 609 aaKnown RBP12.46□□□□□ -0.42
COL6A3-206ENST00000409809 FCRL3Q96P31 734 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms